barSeed - Barley Seed Development Database

Probe ABC14331

Source Contig ABC14331

barSeed

Links

Affymetrix Source Sequence (606 bp)

>ABC14331 606
CTCGCCACCACACCCAGTCGCCCACGCACCCGCTGCTCGCTCCCTCGGCTCGGCATCGAT
CTCTCTCTCCCTCCACGGCAGGCCGGCGTCGTCGATCGCGTGCTTGCCAGATCTGAGGTC
AAAGCAGGAGGACAGGACGGACATGCAGGGAGCGCTGGTGGACAGCCCGGGGGCGGCTGA
GGCGGCGGTGCGGCCGAGCAGGTACGAGTCGCAGAAGCGCCGGGACTGGCACACGTTCGG
GCAGTACCTGCGCAACCACCGCCCGCCGCTGGAGCTCTCGCGGTGCAGCGGCGCCCACGT
GCTGGAGTTCCTCCGCTACCTCGACCAGTTCGGCAAGACCAAGGTCCACGCCCCGGGCTG
CCCCTTCTTCGGCCACCCTTCCCCGCCGGCGCCGTGCCCGTGCCCGCTCCGCCAGGCCTG
GGGCAGCCTGGACGCGCTCGTCGGCCGCCTGCGCGCCGCCTTCGAGGAGCACGGCGGGCG
GCCCGAGGCCAACCCGTTCGGCGCGCGCGCCGTCCGCCTCTACCTCCGCGAGGTGCGCGA
CTCCCAGGCCAAGGCGCGCGGCATCGCCTACGAGAAGAAGCGCCGGAAGCGCCCGCCACC
GTCGTC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_79317.1	642	0.0	238 - 642	99	404 / 405	CUST_37716_PI390587928	ABC14331
MLOC_69748.1	2752	3e-141	561 - 996	88	382 / 436	CUST_26259_PI390587928 CUST_13924_PI390587928	ABC14331 ABC43234
MLOC_58203.1	1407	1e-125	568 - 955	88	341 / 389	None	ABC14331
MLOC_6647.2	1441	1e-106	701 - 1102	84	341 / 405	None	ABC14331
MLOC_5710.1	1635	1e-101	314 - 715	83	336 / 403	None	ABC14331
MLOC_72443.1	1120	4e-91	789 - 1120	85	282 / 332	None	ABC14331
MLOC_9099.1	1444	1e-85	1271 - 1442	100	172 / 172	CUST_21419_PI390587928	ABC14331 ABC16608