barSeed - Barley Seed Development Database

Probe ABC14246

Source Contig ABC14246

barSeed

Links

Affymetrix Source Sequence (1309 bp)

>ABC14246 1309
GAAAAAACGAAGAAAAGCAGCAAAGGAGTCACTCGATTCCTTGCTAAAACAGGAATGTGT
TGATAACTCAAATCCCAGATATTCAAATGGAGATTCTCGTGATAGTGGGATCTACGCAAG
AAATAGCAGTGGTGATTGTGTTCTTCGGCTTGGTGCTGACTGTGCATCCGAGAACTTAAC
ACTGTTAGAAACTGGAGAGTCTGTATATTGTCCAATTCTGCAGGAAGGACCCATTATGAC
AGCAGAGCTCATAAAAGAAACAGAGGAACTTGTCTTACGGACAGGAAGTGTTGGTGCTGG
CTGTTCTCAGCTTTTATCAGATATGCAGGCGTTCAAGGCTGCAAACCCGGGATGTGTCCT
TGAAGATTTCATTAGGTGGCACTCCCCACCTGACTGGTCTGAAGATTTTGCAGCAAGCAA
TGCAACCGTAGGAGAGGGCTCATCTAGACGTGGCCGGCTAAGTGACAGAATGCAAACAAA
AGAAGGAAATTTGTGGAAGGAATTGTGGGAAGCAGCAAAACCTATACCTGCTGTTGAACA
AACTCCGCTATATGATGAAGATTTAGCTGTGGAGAGCATATTTGATGCCTTGGAGGTTAT
TGAACCAGCAAAACTGTTTCAGCAGCTACTCTCAGTCATTCTTTCTGTATGCTTCGTAGC
AGCTGAATCAGTGCTACCAGCAGACAGTAATCTGTCAAAATTATTCTACGATTGTAAAGA
CTACATCATTGGCATTTACCAAGATGACATGTCGAAAGAAAAGCTGGATGAGATCTGCAA
GGTTTATGAGACGATGGAAGCCATAGTAACCCATCCTGAAGACGCTCTTCAGATCACGGA
GCAACCTGACGAGAAGTCTGCCGAGATTAAAAACCGGTTCAAGCTCAAGCTGAACTTCAA
CGGCAAAGATGGTCAGTCTCTGTGGAAGCGTGCAGCAAAGGATGAGAAGAGAACATCCCC
AAATGACGAGAAAAAATCACCGGAAGAAAAGAACTCGAATTTTTTCTCGAACCTTCGCGA
GAGGAAGGCCGCCTTATTTTCAAAAAAGAATGCAAAAGCTTCAGAGTTGCCGTCGCCACC
CCCACCATCAGCGCTGGGCCCATTTGACGAGAGCGAATGGACGATTTTGTAGTTGAGGCT
CGAGGATGTTTCCTTTTGTACAACTTGTAAAGAAGGTGCCCCAAGCTGTAAATGCTCATC
CAATTCATTGAACACTTTGCAATAAACTTGAAAAGATAAACAATTCATTGTAGTATATAA
GCGTCAAGGCTCGATTCAGAGTTCTCCTTGTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_68256.4	2213	0.0	1 - 1275	100	1275 / 1275	CUST_16681_PI390587928	ABC14246
MLOC_68256.3	1931	0.0	1 - 1275	100	1275 / 1275	CUST_16681_PI390587928	ABC14246
MLOC_68256.5	2186	0.0	1 - 1269	100	1269 / 1269	CUST_16681_PI390587928	ABC14246
MLOC_68256.8	2139	0.0	886 - 2139	100	1254 / 1254	CUST_16681_PI390587928	ABC14246
MLOC_68256.9	2115	0.0	1 - 1223	100	1223 / 1223	CUST_16681_PI390587928	ABC14246
MLOC_68256.11	2171	0.0	1 - 1221	100	1221 / 1221	CUST_16681_PI390587928	ABC14246
MLOC_68256.10	1652	0.0	1 - 1221	100	1221 / 1221	CUST_16681_PI390587928	ABC14246
MLOC_68256.7	2648	1e-149	1269 - 1556	100	288 / 288	CUST_16681_PI390587928	ABC14246
MLOC_68256.6	2214	1e-149	1269 - 1556	100	288 / 288	CUST_16681_PI390587928	ABC14246
MLOC_68256.12	1436	0.0	85 - 867	100	783 / 783	CUST_16681_PI390587928	ABC14246
MLOC_68256.2	3125	4e-69	1995 - 2137	100	143 / 143	CUST_29924_PI390587928 CUST_24550_PI390587928	ABC14246
MLOC_68256.13	2245	1e-149	873 - 1160	100	288 / 288	CUST_16681_PI390587928	ABC14246