barSeed - Barley Seed Development Database

Probe ABC14148

Source Contig ABC14148

barSeed

Links

Affymetrix Source Sequence (1081 bp)

>ABC14148 1081
GCTCTCGGCCCCGCGGCTCCTGCCATAAACCAGGCCAGCCGTCGCGCGGCGCCCCACCTC
TCCTCTCGCCCGGTCAAAGCCAGAGAGCACCAGCCTCAACCTGGCTGGCGGCTGCCGCCT
TCCCCTCCGCTTCTAATCCTCCGCCCCTCCCCGCCTGTGACCATCGGCTCGACCGGCGCC
GAATCTGGGACGGCGCGGGGGGATGGGGGTGTCGCCGGTGTCGCCGGGGGCCAGCGCCGG
CTACGAGTGCTCCTTCAAGATCCTCCTCATCGGGGACTCGGGCGTCGGCAAGAGCAGCCT
CCTCCTCAGCTTCGTCGCCGCCGCCAACCTCGACGACGACATCGCGCCCACCATCGGAGT
TGATTTCAAAATCAAGTTTCTTACTGTTGGTGGAAAGAAACTGAAGCTGACTATATGGGA
TACTGCTGGCCAGGAGAGGTTTAGGACAATCACTAGTTCTTACTATAGAGGTGCTCAAGG
AATTATTCTAGTATATGACGTCGCGAAGAGAGAGAGCTTCACAAATTTGGGTGATGTATG
GACTAAGGAGATAGACTCAAACTCATCAAACAAAGACTGCATAAAAATGCTTGTTGGAAA
CAAAGTTGATAAGGATGATGAGAGAACAGTCACAAGAGAAGAAGGTCTTGCTTTCGCACA
AGAATCCGGATGTCTGTTTCTTGAGAGCAGTGCAAAAACACGAGAAAACGTCGAGAATTG
TTTTGAAGAACTTGTGCTAAAGATCCTTGAAGTTCCAAGTCTCCTGGAGGAAGGCTCGTC
ATCCGTTGTCAAGAGGAACATTCTGAAACAGCAGCAGGAAAGTCATGCAAAGTATGGTGG
TAGATGCTGTCAATAGATCCGTTGCGTATGATTGAGCTCGCTATCTGTGGTCACCGTATC
GCAGGCAAGTTCTAGATACCCAAACTGTAGCTGTTGTCGCGTTCTCGTTGTACATGAGCT
GTGTCTAAACAATCTGTGAGTAGAAAAGGTGGGGAGATTGGGAAAGTAAGTACAGTAGTT
TGTAAGGTTTTGGAGAGTGGTTAAAATTGGTTTGTACAAAGGGGAACGCTGTGTCTATAC
T

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_59239.1	1976	0.0	1013 - 1734	99	722 / 723	CUST_38515_PI390587928	ABC09932 ABC11034 ABC14148 ABC36738 ABC44346
MLOC_2788.1	1253	8e-160	552 - 1132	84	493 / 585	CUST_34023_PI390587928	ABC09932 ABC14148
MLOC_67264.1	614	1e-92	1 - 185	100	185 / 185	None	ABC14148
MLOC_39648.1	365	4e-88	3 - 182	99	179 / 180	None	ABC14148
MLOC_59238.2	3117	3e-59	2993 - 3117	100	125 / 125	CUST_4268_PI390587928 CUST_17868_PI390587928	ABC11034 ABC14148 ABC44346