barSeed - Barley Seed Development Database

Probe ABC14141

Source Contig ABC14141

barSeed

Links

Affymetrix Source Sequence (1208 bp)

>ABC14141 1208
GTAGATTATGAGATATCCCGACAGATTCTTCTTCACAAAGAAAGCCAGGCTGACAAAATT
GTACAAGAAACCCGTCTATGGGATGAATCTTCTCAGAAAACTTTTACAATGCGGAAAAAG
GAGGGACTTGCCGACTACAGATATTTTCCTGAGCCTGATCTTCCTGAAGTTGTTCTGACT
AGTGAGTACATTGATGAAATTCGTAATTCAATGCCGGAGCTTCCAGAGGCAAAGCGTAGG
CGTTATGAGAACATGGGGCTCAGCATGCAAGATGTTATTTTCCTTGCTAATGACGATATT
GTTGCTCATTTCTTCGATTCTACACTTGAGCGTGGTGCTGATGCAAAGCTGGCTGCTAAT
TGGATCATGGGTGACATTACGGCTTATCTGAAGAATGAAAAGCTCTCTATTGATGAAATT
AAATTAACACCTCTTGAGCTTTCTGAACTGATTGCATTCATAAAGAATGGTACTATCAGT
GGGAAGATTGGCAAGGAGATTCTTGTTGAGCTCATTACTAAAGGCGGAACTGTCAAGTCG
GTGATAGAGGAGAAAGATTTGGTTCAGATAGCAGATCCAGCAGCAATTGAGGCCATGGTA
GATAAAGTACTCGCCGAGAATCCAAAGCAACTTGAGCAGTATCGGGCTGGGAAAACCAAG
TTGCAGGGATTTTTCGCTGGGCAGGTGATGAAAGCATCGAAAGGTAAAGCAAGTCCTGTT
TTATTGAACAAAATCCTCGGGGAGAAGTTGAAGGGTAATTAAAATTGCCGAGGTGTTTCG
GCACAGAGAGAATATCTTGCCCTTGATGAGTGAACCATCAGATTACAACTAAAGTGAAAC
CCCGTAGCAGAATCACATTCTTTTGTAAAAACACTTACTTGGAGTTTGGAGTGTTGATTA
CCTTTCGCTCTCTTTTCACTACAGAGTGGATTTTGGAAAAGCAATCCAGTTCACATGACA
CAAAGATGAAGGATATGCATGGTATGTGTTTGAGCTGATAATAGACTGGAATGGTGTGGT
GTGCAGATGAATCAGTTGCGTATGCTTACATGTTTTTACTCGTCGTCTTTTTTGCATTTG
ATCTTATGCAGCTGTAAACTCATTTGTAAATTGGATACATCAGTATCATGAATGCGGCTG
TACTTATTGAAGTATTATTAAGTTTAGTCATTGAGTTGTTCCAGCGTTAGCAAAAAAAAA
AAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK363707	2244	0.0	1055 - 2244	100	1190 / 1190	CUST_13229_PI390587928 CUST_13230_PI390587928	ABC14141 ABC14502
MLOC_73744.2	1326	0.0	1 - 1179	100	1179 / 1179	CUST_13229_PI390587928	ABC14141
MLOC_73744.1	1235	6e-132	1 - 262	99	261 / 263	None	ABC14141
AK365163	2196	0.0	1045 - 1798	91	689 / 754	CUST_20463_PI390587928 CUST_33432_PI390587928	ABC14141 ABC14502
MLOC_74973.1	1397	0.0	244 - 997	91	689 / 754	None	ABC14141