barSeed - Barley Seed Development Database

Probe ABC14088

Source Contig ABC14088

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Affymetrix Source Sequence (240 bp)

>ABC14088 240
GCACGAGGAATACAACTACCGGAAATGCCACGAAGGAGACTCTTTTCTGCAAATAAAGAA
CAAGGATGAAAGAGAATGGAGAGACTAGAGTTCGGAGGCTGATTTAGTTCTTGAATAGCA
CTGCCAAAATTTTCTTTAACTTCCTTGTCCCCCAGGGTGCAGAGAGTTTATTCCAGTTTG
TATAATGTGAAATGGTTGCTATAGGAAATCAGTGGGTGGTATCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK363817	5986	2e-104	3097 - 3314	98	214 / 218	CUST_25217_PI390587928 CUST_36276_PI390587928 CUST_29072_PI390587928 CUST_18144_PI390587928	ABC04362 ABC06621 ABC14088 ABC15766 ABC40605
AK355263	819	2e-104	600 - 817	98	214 / 218	CUST_18144_PI390587928	ABC14088 ABC40605
MLOC_48344.3	887	2e-104	574 - 791	98	214 / 218	CUST_18144_PI390587928	ABC14088 ABC40605
MLOC_48344.1	1383	1e-97	824 - 1041	96	210 / 218	CUST_18144_PI390587928	ABC14088 ABC40605
MLOC_48344.2	1267	1e-97	708 - 925	96	210 / 218	CUST_18144_PI390587928	ABC14088 ABC40605