- Probe ABC13958
- Source Contig ABC13958
Affymetrix Source Sequence (1208 bp)
>ABC13958 1208 CCCGCATCTTCTCTCTGCGCTCCCACGCCCTAGGGTTAGCCGCCGCCTCCGACGACCTTA TTCCGACGAGCTTCGACAGCCATGGCCTGCGCGCAGCATCCTGCGAAGCTCACCTAGTAC CGCTCCGTTGATCCCTCCATCCATATCCGCCCCTCCCTACCTCCAACGCTCGCGCTCAAC CATCCCCCGCGGCTAGGTTTCGGGGCGCGACCTAGTCTCCACCACCGACATTTCATTGCG GAGCCTCACAGATCTTAGAGAGCCCAACACCCACCCTCCACCAACTCCTAGGTTTTCTCC ATCGACGCTGCCGCCGCCACCCGCCTGATCTTCGGCCACCGGAGTCCCTCCTCTCCTCTG GCCGGTGGTTTGAGATCCGCCTCGCCCGTGAAGCACTCCGTCCAGATCTCCCCCTCCCAC CTCCGAGTGCGTGGAAATCTTCCACCGATTTGCATCTCCCATCATGAACTAGATGTCGTC CGAGCTGCCTCTCCTGCAGCTTGGCGCGGCTTCTCCACGGATGCTACTAGTTACCCCTAC TGCCACCGGACCTGCATGTTCAACAAAGACCAGCCGCTGCTTCTCCCTCCACCGTGCACA TCTTCGCCATCATCGCCGCCGTCCTACTTTTATTCCCCTCCTGAATCGAGGGAGCAAGAG AGATGAGGCGCTGATCCTGGAGGAGGTGTCTAAATACAACTCCAAGGATGGCTGCTGGCT CATCATTGTTGGCAAGCGCTGGGTGGTGGCGTCCTTCCATCATCACCTGCCCCTTGGCAA CTCATTTTATTTATGTACCAAGTACACCAACTTCAACTACTCCAGCCTCCATGTGCAGGC ATGTAAACCACAACCTTCTGGTCTGTATGTTCTTCTCATTTGTGATCCTTTTAACGCGAG GAAGTTCCTCAATCCAGAATTGGCTACTCAGAAGAAGTGGAAAGTGGAAGACAGACGATG CTATGGTTTCTCAATTTGCTGTTACATGTGAACAATTTAATTTTATGTTCTTTAATGTGT TCCATTGAAGCCACAGTGGTTGTATTGGTCATATAGTACCAACACTTGTTGGATTTGTAG TGGAGTTGAAGGTTGAATTATTTTATGTGATGCATGTTTGTAAAGTATGTGCCATGATGT GCTTAAATGAACGGAACTACTTATCATAATGTTTTTTCGTTGGAATTATCTAAAAAAAAA AAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_77704.2 | 1262 | 0.0 | 1 - 1190 | 99 | 1187 / 1190 | CUST_32757_PI390587928 CUST_30350_PI390587928 | ABC13958 |
| MLOC_77704.4 | 1156 | 2e-136 | 1 - 264 | 100 | 264 / 264 | CUST_32757_PI390587928 | ABC13958 |
| AK250023.1 | 3330 | 7e-151 | 3041 - 3330 | 100 | 290 / 290 | None | ABC13958 |
| AK366184 | 2777 | 3e-90 | 2597 - 2777 | 100 | 181 / 181 | None | ABC13958 |
| MLOC_77704.1 | 2963 | 0.0 | 17 - 475 | 99 | 458 / 459 | CUST_30350_PI390587928 CUST_32757_PI390587928 | ABC13958 |
| MLOC_77704.3 | 3387 | 2e-180 | 1 - 346 | 99 | 345 / 346 | CUST_30350_PI390587928 CUST_32757_PI390587928 | ABC13958 |
| MLOC_23603.1 | 1704 | 7e-131 | 196 - 558 | 90 | 329 / 364 | None | ABC13958 |
| MLOC_22368.1 | 2106 | 3e-114 | 1 - 284 | 93 | 264 / 284 | None | ABC13958 |
| MLOC_22369.1 | 2092 | 4e-113 | 1 - 282 | 93 | 262 / 282 | None | ABC13958 |
| MLOC_77564.1 | 1971 | 3e-105 | 1660 - 1961 | 90 | 271 / 302 | None | ABC13958 |
| MLOC_22368.4 | 2139 | 1e-103 | 2 - 254 | 94 | 237 / 253 | None | ABC13958 |
| MLOC_22368.2 | 1370 | 2e-102 | 2 - 252 | 94 | 235 / 251 | None | ABC13958 |
| MLOC_22368.3 | 2148 | 3e-100 | 2 - 248 | 94 | 231 / 247 | None | ABC13958 |
| AK368414 | 953 | 1e-93 | 702 - 943 | 93 | 224 / 242 | CUST_15397_PI390587928 | ABC13958 |
| MLOC_22368.5 | 1956 | 6e-87 | 1 - 214 | 94 | 201 / 214 | None | ABC13958 |
| MLOC_22368.6 | 1969 | 8e-86 | 1 - 212 | 94 | 199 / 212 | None | ABC13958 |
| MLOC_22368.7 | 2000 | 8e-86 | 1 - 212 | 94 | 199 / 212 | None | ABC13958 |
| MLOC_22368.9 | 2035 | 3e-80 | 9 - 198 | 95 | 181 / 190 | None | ABC13958 |
| MLOC_22368.8 | 1344 | 3e-80 | 9 - 198 | 95 | 181 / 190 | None | ABC13958 |
| MLOC_22368.11 | 1981 | 8e-61 | 1 - 152 | 95 | 144 / 152 | None | ABC13958 |
| MLOC_22368.12 | 1995 | 1e-59 | 1 - 150 | 95 | 142 / 150 | None | ABC13958 |
| MLOC_22368.10 | 1734 | 1e-59 | 1 - 150 | 95 | 142 / 150 | None | ABC13958 |
| MLOC_77564.2 | 1557 | 2e-52 | 1423 - 1557 | 95 | 128 / 135 | None | ABC13958 |