barSeed - Barley Seed Development Database

Probe ABC13743

Source Contig ABC13743

barSeed

Links

Affymetrix Source Sequence (729 bp)

>ABC13743 729
GCAGCACCGCAACAAGCGCGAGTCCGCCGTCCGGCTCCGCCACCATCCCACCGGCATCGT
CGCTCAGGCTGTGGAGGATAGGTCACAACATAAGAATCGATCATCTGCTTTATCTCGGCT
TCGGACCCTGATTGCTCTCAAAGTCAGGAGGCCGATAAACCTTGATAACTACACTCCTCC
AGTTGAACTTCTTCAGATATTGCCACTGAAGTCTACTATTCGATCAAAGGACGTTGGCAA
TCAAATTGGCCCAAATAACCCAAAATTTTCACCAGGAATGCAAGCTTTATTAGATCTTCT
ATTTGCTGTTGAAGGTTCTGTATCAGAGGCAGCGAAAGTTCTAGGCCTAAGCACTGGTGC
CCTGTCAAGGTTAATTCTATCAGATGATTCTCTGCGAGCAGCTGCAAATGAACTGCGAGC
CTCCAAGGGACTGAAGCCACTAAGATGATGCCCCTTTACAATGTTGTCATCTTCAACTGC
GCCACAGGTGCCAAGATGTCTCATTGTTCATGATTTCATGGCATGCCATTGGAGCTTATG
CCCAATTCCCTACCGCAAGAAATGCAGAACATACACATGGTCTGTCTTATACAGGGTCAT
CATCATGCTTGCTTGTTTGTCGCACACCATTGTAACCTTGTTGTTGTACAGTGCAATTGT
ACTTTCACATGTTGCCATCGCTTGATGATGCCTTCAACAAATTGGATCTATTAAATATAA
GTTTGAGCG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK368762	1097	0.0	370 - 1097	100	728 / 728	None	ABC10150 ABC13743
MLOC_51098.1	2602	0.0	1511 - 2238	100	728 / 728	CUST_1858_PI390587928 CUST_11882_PI390587928	ABC13743 ABC14307
MLOC_51097.1	2046	7e-159	1327 - 1630	100	304 / 304	CUST_1858_PI390587928 CUST_26518_PI390587928 CUST_11882_PI390587928	ABC13743 ABC14307
MLOC_51097.4	1791	5e-150	1504 - 1791	100	288 / 288	CUST_1858_PI390587928 CUST_26518_PI390587928 CUST_11882_PI390587928	ABC13743 ABC14307