barSeed - Barley Seed Development Database

Probe ABC13714

Source Contig ABC13714

barSeed

Links

Affymetrix Source Sequence (1116 bp)

>ABC13714 1116
GGGCGAGACCTACTTCCACAAAGCCACCGGCCGATCCTCCAACGGCCGCCTCATCATCGA
CTTCATCGCGGAGGCGCTGGGGCTGCCATTCGTGCCACCGTACCTGAGCGGGCGGAGCGC
GGAGGACTTCGTCGGCGGGGCTAACTTCGCCGTGGCCGGCGCCACGGCGCTGAGCCCGGA
CTTCTTCTGGGAGAATGGAGTGCCCGCGTTTCGGGCAGACACGGTGCACCTTGACATGGA
GATGGAGTGGTTCCGCGACCTCCTCGGCCTGCTCTGCCCCAACGACGTCGCTGATTGCAT
GGACATGATGAGCAAATCTCTCTTCTTGGTTGGTGAAATTGGAGGCAATGATTACAATCT
ACCTCTTTTCTACGGGGTGCCCTTTGAGAAGATCCGCTCCTTCACACCAAGTATTATTGC
CAAAATCTCTTCTACTATTGCCGATCTGGTTGAGCTAGGTGCCAAAACTTTGCTAGTTCC
TGGCAACCTACCAATTGGGTGCATCCCAGCCTACCTCACGACATACAAGAGTGACAAGAT
GGACGATTATGAACCAGAGACGGGTTGCATCCGTTGGATGAACGAGTTCTCACAATACCA
TAACAAACTTCTTGTGGATGAGTTGGAAAATTTGCGAAAGCTTCATCCTGGAGTTTTGAT
CATATATGCTGATTACTATGGAGCTGCTATGGAGATCTTCAATTCTCCCGAACAATTTGG
GATAGATGATCCTTTGGTGGCTTGTTGTGGTGGAGGAGGACCATACGGTGTGTCTGCAAC
TGCAGGATGTGGGCATGGAGACTACAAGGTATGCGATGACCCACAAAAATATGCATCATG
GGATGGCTTCCATCCCACAGAAGTTACATACAAAGGCATTGCCAGTGGCTTGCTAAGAGG
TTCATATACTCAGCCACCAATTGCCACCACCAGTTCATGTCCACAAACTACCGGGTTTGC
TTCTTCCCTTGAAAACAAGGTCCTATACGACATGTAATTATGTAACCATATATAGTTTAA
ATATGCTGAGTTTTTTCAGGTCAAATAGGACAATTTTACATTATGAAAATTTGGCTACCT
GTAAGGGGTAGCCATGTCGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK249357.1	1377	0.0	261 - 1374	99	1109 / 1114	None	ABC13714
MLOC_69648.2	1670	0.0	2 - 811	99	807 / 810	None	ABC13714
AK364585	4023	0.0	211 - 1224	80	813 / 1019	CUST_18956_PI390587928 CUST_40010_PI390587928	ABC13714 ABC26368
AK375738	1337	0.0	234 - 1226	80	804 / 1007	None	ABC13714
AK361875	1539	0.0	234 - 1175	80	767 / 956	CUST_14939_PI390587928	ABC13714
MLOC_57817.1	1504	0.0	407 - 1420	79	807 / 1019	CUST_18956_PI390587928	ABC13714
MLOC_69648.1	394	1e-172	63 - 394	99	331 / 332	None	ABC13714
MLOC_6358.2	1790	5e-152	381 - 672	100	292 / 292	None	ABC13714
MLOC_57817.3	803	3e-129	40 - 762	78	569 / 726	CUST_18956_PI390587928	ABC13714
MLOC_6358.1	3170	2e-115	581 - 806	100	226 / 226	None	ABC13714
MLOC_23746.1	462	2e-92	35 - 462	81	349 / 430	None	ABC13714
MLOC_57817.2	1551	2e-57	837 - 1075	84	200 / 239	CUST_18956_PI390587928	ABC13714