barSeed - Barley Seed Development Database

Probe ABC13702

Source Contig ABC13702

barSeed

Links

Affymetrix Source Sequence (891 bp)

>ABC13702 891
CAACAAAGCACAGAAAAAGAATAAATGGGATAAACTAAAAAGTGCTTACTACATTATGGA
AGAGTTTGAAAAAGGAGACAGATATGGGCTGGGATCCTGTGAAGCAAACAGTTACAGCTT
CAGCCGAGCGTTGGAAAAATCTTAAGAAAAAATACCAAGGTTGTGGTAGGTTTCAAAAGG
CTGGACTTCAAAATGAGGACCTTTTGGCCAAGATCTTTGAAGACTTGCGCAACACTGCTG
AAGACCATTGGCCTCCTGCTAATGGTAGCATGCCTCAAAGTCCTCAGAATGTTGATGCTG
AAGACCACGGAGATGAGAACGAGGACAAAGAAAGTGAGGAGGAAGATGAGTCTCCAGTTA
TTAATAATAAAGGAAAAAGTGTTGGTGGTGCTATAGAAGGAAAAGGAAAAAAATCAAAAA
GTGATTCTGCGATCATGCAATACCATTTGAAAGAAACTGTTGAGCTGAGCAAGAAGTCGC
AAGCAGCCATTGAATCCATTGCTAAACAACGAGAGGATGCCTCAGTTTGTACCATCAAAG
ATGCGATGACTCTGGTTACAGAATGTGGTGCTGTCATCGGCACTAATGAGCACTTCATTG
CTTCTGAGATTTTCGTAAAGAAGGAGCAAAGAGAAATGTTTATGACCATACTTGATGCTA
GTGCACGCTTTGACTGGCTTCAAAGGAAATATGATGCCAAGTATGGCAAATAGATTATAA
TATTTTGGTTGTAATTGTTAAGGCATTCCTATAAGTAGTATGCCTTCAACACTCCTATCT
TTCATGTTGCATTTAGTTATTTATTTGGCTCGTAAGACCCTGTCCAGTTTGTTACAAATT
ATCTATTTATGTACGTCATTATTGTTATTGACTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK251184.1	2820	0.0	1929 - 2817	99	882 / 890	CUST_29946_PI390587928	ABC13702
MLOC_28030.1	1141	0.0	8 - 865	97	834 / 860	CUST_29946_PI390587928	ABC13702
MLOC_28030.2	1093	0.0	1 - 826	97	803 / 828	None	ABC13702
MLOC_28228.1	801	0.0	1 - 801	98	785 / 802	None	ABC13702
MLOC_1300.1	1187	0.0	1 - 822	96	790 / 823	None	ABC13702
MLOC_33440.1	396	0.0	1 - 396	100	396 / 396	None	ABC13702
MLOC_30501.1	838	0.0	1 - 404	96	390 / 405	None	ABC13702
MLOC_78727.1	294	3e-153	1 - 294	100	294 / 294	None	ABC13702
MLOC_74947.1	251	5e-126	1 - 251	99	249 / 251	None	ABC13702
MLOC_31604.1	364	5e-111	147 - 364	100	218 / 218	CUST_29946_PI390587928	ABC13702