barSeed - Barley Seed Development Database

Probe ABC13525

Source Contig ABC13525

barSeed

Links

Affymetrix Source Sequence (1126 bp)

>ABC13525 1126
TGAAGGATGCTGCTTTGTCGGATGACAAGTTGCGTGAAACCTACTTTGAGATTGTTACAA
CGATGCGGACACTTTACCAAAAGTGCAAGCTTGTCCATGGTGATTTGAGTGAATACAACA
TTCTTTATTATGAGGGACACTTGTACATCATTGATGTTTCACAGTCTGTCGATCTTGACC
ATCCTTCAGCTTTGGATTTCCTGAAGGAAGATTGCTTGCATGTTAATGATTTCTTTGAAA
AACGAGGCATTGCTGTCATGACAGTAACAGAGCTATTTAATTTCGTTGTGGACCAAAATA
TCGCCGATGAAGATGTTGATGATTACCTGGAGAAGATTCAGCAAAAGATTTTGGAAAATG
AAGATACAGCTGCAGATGATGATGAAATTGCTCCGACAGTCTTGGTGCAGACGTTGGATT
ACGTGAAGCAATGTGAGGCAGACATTGTCAGCATGTCAATGATGCAACGCCCATCCGTTG
GTTACGAGCCAACAGCAGATAAGCTTTATGACCAGCCACTGTTAGGATTTGTGCGGGCTA
AAAACGAGCCTACCGAAAACCAGGAAGCACGACCGTCCCAAAATGTACTGGAAGAACCCT
TGGACCTGCAAACCAAGTGCTCCTTGGAGAACAATGAGGAAGATGAACCGGGTGACAGCG
AGTCCTGCTCTAGTTCTGATGAAGACGGTTCGTGGCACGAGTCCACAAAGTTGGGGCCCG
AGGAAAGGAAGGCTGCTCGCAAGGAAAACAAGAAGAAAGTGAAGGAAGAGAAGAGGGAAA
CTCGCAAGAAGAAGATCCCCAAGGCTGATAAGAAGAAGAGGAAGAAAATGGCGAAAGCCA
AGTGCAAGCGGTAGTGGATCACTGCTGGTTGGCAATCCACATGGTTGACACCATCAATTT
TGTTATACAAATCTAGTTCCAGTCAGTCTTGTCTCCAATGGAGATGAGTGATGTGTTGGA
TGCGCTTTGTTTTCTATTGTAGTCCTATAAACGTATTGCTTGAAAACCAATGTCGTAAAA
GATCCGTCCCGCGGCGACGTTACCAAATATTTTGAGTTGTGTTTGTGTATGCTTGATGAT
GTGCATGAATGACATATCTTAATTTCTTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK356528	2129	1012 - 2120	100	1109 / 1109	CUST_3007_PI390587928 CUST_13983_PI390587928	ABC13525
MLOC_11507.1	1388	1 - 1091	100	1091 / 1091	CUST_3007_PI390587928	ABC13525
AK250804.1	2308	1247 - 2293	100	1047 / 1047	CUST_13983_PI390587928	ABC13525
MLOC_11507.2	1451	1 - 975	100	975 / 975	None	ABC13525