barSeed - Barley Seed Development Database

Probe ABC13499

Source Contig ABC13499

barSeed

Links

Affymetrix Source Sequence (605 bp)

>ABC13499 605
GGGGATACTGTTGGTGACCTTGTACGCGACGTGAGTGAACTGAACATATATTTTAAGCAA
GATTTCTTATAGTTATACACTTATGACTATCTCTGTTAATGCTCGGTCCATACATTTGGA
TTTACACTACAGTTCTGTCATGAGTCATGCCAAGTTTATCCGAAACCTATTTCAGGCCTG
GCATATGTGGAAGGACCAAAGGTTGCATGAGCTCGTCGATCCGTCTCTAGGGAACGAATA
TGAAATCGCTGAGATAAAGCGATGTGCTCAGGTGGCACTGCTTTGTGCCCAGGAAGATCC
AGCAGATCGGCCCACCATGACCGATGTTGCTGCCATGCTGAACTCTGAAAGCATGAGCTT
CTCAATGGAGCCTAAGCAGCCTACAGTGCTGAGCAAAGGAAGTGACCGTGAAAGCACGGC
ATCTACATTTATGGGCCAATCAAGCAGGACAATAGACATAACCATCACGAGCTCAACTCC
CATATCGACTAGAGTTCGAATCATTCTGGACCCGAAGGTTTGATATGAAGAAAATAATTC
AATGGTAATAAGTGTTAGATGTGTACAGTACCCCGTTTTGATATATCTCACATTGTGTAA
GGGGT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK356929	1775	0.0	1217 - 1644	99	428 / 430	CUST_41277_PI390587928 CUST_29611_PI390587928 CUST_16460_PI390587928	ABC13498 ABC13499
MLOC_66402.1	1020	0.0	166 - 593	99	428 / 430	CUST_16460_PI390587928	ABC13498 ABC13499
MLOC_66402.2	1118	0.0	166 - 593	99	428 / 430	CUST_16460_PI390587928	ABC13498 ABC13499
MLOC_10884.2	1506	1e-101	1122 - 1478	85	306 / 358	None	ABC13498 ABC13499
MLOC_10884.1	1670	1e-101	1285 - 1641	85	306 / 358	None	ABC13498 ABC13499
MLOC_36511.1	1500	1e-96	954 - 1309	85	306 / 360	None	ABC13498 ABC13499