barSeed - Barley Seed Development Database

Probe ABC13498

Source Contig ABC13498

barSeed

Links

Affymetrix Source Sequence (1064 bp)

>ABC13498 1064
GAAATAATTCCGAAAGATAACCATTCTTCAAACATTTTGCAGACAGAACAAAAGGTCCAT
TGCTAAACTGGTCTAAGCGATTCAAGATAATTACAGGGTTAACCGAGGGAATTGTTTACC
TGCATAAGCACTCCATGTTCTGGCTTGTCCACAGAGATTTGAAACCACATAATGTCCTCT
TGGATTGTAACATGATCCCAAAGATTGCTGATTTTGGATCAGCTAGAGCACTGAGTTCAG
ACGTAGCAGAAGAGCGTACGAGTAGAGTGGTGGGAACCAGGTATGAGCTGCCTGTTATAT
CAATCCAAAGTTTAGATGTTCTAATCTCACAATTTCGATATCTTTTGTTTGACTTTTCAG
TGGTTACAAAGCTCCGGAGTATGCATCTCGAGGAGTTTACTCGATGAAGACAGATGTGTT
CAGCTTTGGCGTTTTGGTTCTGGTGATTATTAGTGGACGAAAGAATACCATACTCGACAA
GCGAGGGGATACAGTTGGTGATCTTGTACGAGATGCCTGGCGTATGTGGAAGGAACAAAG
GTTGCATGAGCTTGTGGATCCGCTGTTAGGGGACGGATATGAAGTCGCTGAGATAAAGAG
ATGTGCTCAGGTGGCACTGCTTTGTGCTCAGGAAGACCCTGCAGATCGGCCCGCCATGAC
AGATGTTGCTGCAATGCTGAACTCTGAAAACATAATAAGCTTACCGATAGAGCCTACGCA
GCCCGCTGCACTGATGCTCGAGTGCGCCGACAGAGACATGGCGTCGACATACATGGACCA
ATCAAGCACGACAATAGACATAACCATAACGAGTTCAGCTCCAATGTCGACTAGAGTTCG
AATCATTCTAGACCCGGAGGTTTGATATGATGGAGAACATTCAGTAGAATATATAACTAA
AAAAACGTGAGTGAGGATGGGCTTTTTACGGCTCAGGTAGTGTACATATTCGAGATATCA
AGACCAGTTTTGTGGAGTGAAAATAAACATCTGTGTGGTACCAGCTACATTGTAATTCAA
ACGTACACTGTTCCATGTTTTTCTGTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_36511.1	1500	1e-122	561 - 799	100	239 / 239	None	ABC13498 ABC13499
MLOC_66402.2	1118	0.0	241 - 1095	82	711 / 863	CUST_16460_PI390587928	ABC13498 ABC13499
MLOC_10884.2	1506	2e-80	727 - 967	89	215 / 241	None	ABC13498 ABC13499
MLOC_10884.1	1670	2e-80	890 - 1130	89	215 / 241	None	ABC13498 ABC13499
MLOC_36511.2	1350	6e-116	787 - 1019	99	231 / 233	None	ABC13498
AK356929	1775	6e-151	1062 - 1569	86	442 / 515	CUST_41277_PI390587928 CUST_29611_PI390587928 CUST_16460_PI390587928	ABC13498 ABC13499
MLOC_66402.1	1020	3e-55	769 - 997	84	193 / 230	CUST_16460_PI390587928	ABC13498 ABC13499
MLOC_58625.3	1994	1e-137	620 - 1123	85	428 / 504	None	ABC13498
MLOC_58625.1	1193	1e-98	798 - 1077	90	252 / 280	None	ABC13498
MLOC_58625.5	717	3e-89	470 - 714	91	223 / 245	None	ABC13498
AK364556	3199	1e-87	1976 - 2217	91	220 / 242	None	ABC13498
MLOC_58625.2	1260	7e-86	798 - 1039	90	219 / 242	None	ABC13498
MLOC_58625.4	2497	7e-86	911 - 1152	90	219 / 242	None	ABC13498
MLOC_58625.6	2125	7e-86	470 - 711	90	219 / 242	None	ABC13498