barSeed - Barley Seed Development Database

Probe ABC13445

Source Contig ABC13445

barSeed

Links

Affymetrix Source Sequence (747 bp)

>ABC13445 747
GCACGAGGGACGGGTTAGATATAATCATATTTTTTCGTCCTCTTTGTTCAGAAACAAAAA
AATTATGTTCATGCTGTTGCCTACACGTGAGCTCAAGTCAGTCTCTGTCAAAAAATTATT
TCTACTATTCCCCGTTTTAAGTTATTACCTTTCTGTGTTGCAGATGCTTGATGATTTTGT
TGATGTCACGAATGATGAGAAACTTATTATGCATATGTGGAATTCATTTGTTCGGAAACA
AAGGGTGCTAGCTGATGGTCATATTCCTTGGGCCTGTGAGGCATTCTCCCGGCTTCATGG
AAAACATCTTGTACAGAATCCTCCTCTACTATGGAGCTGGCGTTTCCTTATGATTAAACT
GTGGAACCACAGTCTATTAGATGCCCGTGCCATGAATGTCTGCGGCACAATTCTTCAAGG
CTACCAAAATGAAAGCTCGGACCCCAAGAATATATGAGTTGAGCATAGTGCGCTAATTAT
AATTTAAATCAAGTGGGTATTTGGAGGAGGCCGTAGGAGCAGGTTAAAGAGGTGAAAGCT
GCACCTAAGGCCATGGAGGACCATTCTCAATTCTATTTACCGACCGGTCGTATTTACAAG
GACTGTTGTTCGTCGTGTTCTGTTCCATGTATAAGCGCCTTTAGTGTCGCATAACTTGTC
GTATGGTCTGCAAACTTGAATCAGTGTTGTCAAGTTCTCTTCTTTGCTGTAATGAAACCT
ATCTGAAATTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK253078.1	2499	0.0	1886 - 2454	100	569 / 569	CUST_16428_PI390587928 CUST_336_PI390587928 CUST_325_PI390587928	ABC13445
MLOC_64864.6	1805	0.0	1123 - 1691	100	569 / 569	CUST_325_PI390587928 CUST_16428_PI390587928 CUST_336_PI390587928	ABC13445
MLOC_64864.1	2599	0.0	1965 - 2533	100	569 / 569	CUST_325_PI390587928 CUST_16428_PI390587928 CUST_336_PI390587928	ABC13445
MLOC_64864.2	2426	0.0	1917 - 2426	100	510 / 510	CUST_336_PI390587928 CUST_16428_PI390587928	ABC13445
MLOC_64864.5	3000	0.0	2460 - 2949	100	490 / 490	CUST_325_PI390587928 CUST_336_PI390587928 CUST_16428_PI390587928	ABC13445
MLOC_64864.4	3023	0.0	2486 - 2975	100	490 / 490	CUST_325_PI390587928 CUST_336_PI390587928 CUST_16428_PI390587928	ABC13445
MLOC_64864.7	712	6e-115	488 - 712	100	225 / 225	CUST_336_PI390587928	ABC13445
AK250065.1	1961	6e-70	1121 - 1354	87	204 / 234	CUST_26760_PI390587928 CUST_25617_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.24	1719	6e-70	1063 - 1296	87	204 / 234	CUST_26760_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.18	2423	6e-70	1646 - 1879	87	204 / 234	CUST_25617_PI390587928 CUST_26760_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.13	3107	6e-70	2451 - 2684	87	204 / 234	CUST_26760_PI390587928 CUST_25617_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.2	3188	6e-70	2617 - 2850	87	204 / 234	CUST_26760_PI390587928 CUST_25617_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.3	2613	6e-70	1921 - 2154	87	204 / 234	CUST_25617_PI390587928 CUST_26760_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.4	2557	6e-70	1865 - 2098	87	204 / 234	CUST_26760_PI390587928 CUST_25617_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.21	2851	6e-70	2202 - 2435	87	204 / 234	CUST_26760_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.19	3116	6e-70	2467 - 2700	87	204 / 234	CUST_25617_PI390587928 CUST_26760_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.17	2565	6e-70	1916 - 2149	87	204 / 234	CUST_25617_PI390587928 CUST_26760_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.1	5006	6e-70	4357 - 4590	87	204 / 234	CUST_26760_PI390587928 CUST_25617_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.23	2179	6e-70	1354 - 1587	87	204 / 234	CUST_26760_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.15	3360	6e-70	2535 - 2768	87	204 / 234	CUST_25617_PI390587928 CUST_26760_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.16	3300	6e-70	2678 - 2911	87	204 / 234	CUST_25617_PI390587928 CUST_26760_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.10	2480	6e-70	1927 - 2160	87	204 / 234	CUST_25617_PI390587928 CUST_26760_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.11	3176	6e-70	2623 - 2856	87	204 / 234	CUST_26760_PI390587928 CUST_25617_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.12	2424	6e-70	1871 - 2104	87	204 / 234	CUST_26760_PI390587928 CUST_25617_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.5	2707	6e-70	1877 - 2110	87	204 / 234	CUST_25617_PI390587928 CUST_26760_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.6	2740	6e-70	1910 - 2143	87	204 / 234	CUST_26760_PI390587928 CUST_25617_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.7	2809	6e-70	1979 - 2212	87	204 / 234	CUST_26760_PI390587928 CUST_25617_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.25	2562	6e-70	1679 - 1912	87	204 / 234	CUST_16409_PI390587928 CUST_26760_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.8	2514	6e-70	1631 - 1864	87	204 / 234	CUST_26760_PI390587928 CUST_25617_PI390587928 CUST_16409_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.9	2693	6e-70	1810 - 2043	87	204 / 234	CUST_26760_PI390587928 CUST_25617_PI390587928 CUST_16409_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.20	1998	6e-70	1151 - 1384	87	204 / 234	CUST_26760_PI390587928	ABC13445 ABC20884 ABC39307
MLOC_64195.14	2553	6e-70	1706 - 1939	87	204 / 234	CUST_26760_PI390587928 CUST_25617_PI390587928	ABC13445 ABC20884 ABC39307