barSeed - Barley Seed Development Database

Probe ABC13378

Source Contig ABC13378

barSeed

Links

Affymetrix Source Sequence (803 bp)

>ABC13378 803
GCTGTGTACCATAGCCTGTATGATGACTTCACATGGATGGAGAAGTATGGAGATCCCATG
TTCCGCAGGCATGTCGCAGTGGCAAGTGTATGGGGGCTTGTTGCTTTGAGGCTTTCGGAT
GAGGAGATCCTGCCCTTCAACTACAGCTCTTATGCCGCAGAGCTTGAGAATGGCGCGGTG
GATATAAGCAAGAGAATACTAGGAATGCCTGTCAGCTTATCTCCCCTCCACAAGTCGATC
AAACAGTTCAATACAGCGGTGCTGAAAGTGGATTCTGAGCTTCAGGCTCTGCAAACATCG
AAGTTTTGGTCCCTGCGGCGAAACAACCCGTTGAGGATGAGAGATCTGAATGACCGGTTA
ATGATGACTGAGCGGGCCTTCACGGAGCGGGAAGGACTGTCTGGGAGACCATGGTACAAA
CACATGATTTATGGACCTTCACTATACAACGATTATGGAGCGGAAGTGTATCCAGGTGTT
GATGATGCCATTCAGACAGCAAAGAAAACAAACACCTCCCAGTCCTGGCAATCTGTACAG
CATGAGATCCACAGGATTGCTAGAGTCATCAGCCAAGCCGCGTTAGTCCTAAGTGGAGGG
TTGACATGAAGCTTTTTGCTCTGTTGATTCAACTAGCGACCGCAAGTTTGTGCAAATGTC
AATATGTCATCACCAGTTCATATATAAAAGGAAGTCCATGCACAGATGTAACTTTGCGAA
AACAATTGTAAAGTTGCCCAGAGATGGTATTTCGACATTATATTTCAATAAATAATCCGT
TAACAGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK367813	2476	0.0	1689 - 2475	100	787 / 787	CUST_10996_PI390587928 CUST_36311_PI390587928	ABC13378
MLOC_68917.2	1321	0.0	259 - 1045	100	787 / 787	CUST_36310_PI390587928 CUST_10996_PI390587928 CUST_36311_PI390587928	ABC13378 ABC13379
MLOC_68917.1	1593	0.0	308 - 1094	100	787 / 787	CUST_10996_PI390587928 CUST_36311_PI390587928 CUST_36310_PI390587928	ABC13378 ABC13379
MLOC_68917.3	900	0.0	1 - 694	100	694 / 694	CUST_10996_PI390587928	ABC13378
MLOC_68915.2	2251	1e-56	2129 - 2248	100	120 / 120	CUST_36311_PI390587928 CUST_3115_PI390587928 CUST_3114_PI390587928 CUST_36310_PI390587928	ABC13378 ABC13379