barSeed - Barley Seed Development Database

Probe ABC13294

Source Contig ABC13294

barSeed

Links

Affymetrix Source Sequence (804 bp)

>ABC13294 804
GCTGATGTCCGACTTACCAAGCGGACCGAAGGGAGGGGGCTGGTGATCACCGGATGGGCG
CCGCAGCTGGAGATCCTGGCGCACGGCGCCACGGCCTTCTTCGTGAGCCACTGCGGCTGG
AACTCGCTACTGGAAGGCCTGAGCCACGGGAAGCCGATTCTAGCGTGGCCCATGCACTCC
GACCAGCCGTGGAACGCGGGGTACGTGTGCGGCCACCTCAAGGCCGGGATCGTCATGAGG
CCATGGGAGAAGAGCCGGGAGACGCTGCCGGCCAAGGAGATCCAAGAGGTCATCAATAGG
GCGATGGACTCTGACCAAGGCATCGCCGTGCGGAGTGCGGCGAAGGCGCTCGCCGAGGAC
GTCCGTGCCGCCGTGGCAAACGGTGGCTCGTCGTGGGCGGACATGGAAGAGTTCATCGGT
TGCATCACAAAATGAAGGATTGGCGTCGACAATAAATCAGATGACCAGGCATGGTTTATT
TTGCAGCGCCAATCAGAACATTTCTCGTGTGTGATATGAAGTGTCTCTAGTGTCTCGTTC
GTAGATTTGTTTCCTGTCTTTTTCGTTCGCTCCATTCGGATTCACGAAAAGAGTACCCTG
AAGCCCATCCGTCGCTGCAATGCAATACAGTAGCATGCAGTTGATTGGTCCGTGTGAGCA
CTGGACCCGGTTCTGTTTCAGCGTTACAGTGTAAAACAGTGCTGAAATCACTACGGTACA
TGAAGAATTTCAATGCCAAGACCTGGGAGACAGGCCTGGGATGTAGGTCCGTTACTGGTA
CATTCTACAACTGTCCCGAAACGT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK358082	1829	0.0	1060 - 1829	99	769 / 770	CUST_13703_PI390587928 CUST_282_PI390587928	ABC13294 ABC45672
MLOC_73216.1	1529	0.0	579 - 1383	98	792 / 805	CUST_13703_PI390587928 CUST_282_PI390587928	ABC13294 ABC45672
AK361805	2242	0.0	1752 - 2242	99	490 / 491	CUST_21427_PI390587928 CUST_282_PI390587928	ABC09843 ABC09844 ABC13294 ABC18182 ABC45672
MLOC_79717.1	2028	1e-71	1337 - 1705	80	297 / 371	CUST_26479_PI390587928 CUST_4826_PI390587928	ABC13294
AK372017	1500	1e-61	954 - 1347	78	313 / 401	None	ABC13294 ABC45672
MLOC_1013.1	867	1e-61	446 - 839	78	310 / 398	None	ABC13294 ABC45672
MLOC_69138.1	1808	5e-61	548 - 775	86	196 / 229	None	ABC13294 ABC45672