barSeed - Barley Seed Development Database

Probe ABC13287

Source Contig ABC13287

barSeed

Links

Affymetrix Source Sequence (700 bp)

>ABC13287 700
CGGCATCGCCACCTCATCGACGCCTCGAAGCCGAACCCTCGGCAAGGAACAATACCTAAC
CCTAGCTCGTCCGCCATGGCCAGGGAGGCGTCGTCGTCCTCCGCGCCGGGCCCCTCGGAG
TTGCCGCCGGCCGCTGGTGGCAGCGGCAGCGGAAGCGGCGGGGACACGCCGCGAGTGCAG
CGGCGACCCTCCCGCGGGGACCCGCTCCTCATCGTGTGCGGCTGCTTCAGCGTCGTCACG
GCCGCCACCGCTTTGCTCTGCGTCGCTGTCAACGTCCTCTCCGCCGTCCAGTCCTTCCGC
CGCAACGGCGGCTACATATTCGGGGGCATATTCCGCTGCTATGCGGTGGTGATCTCGCTG
TTCGTGGCCGTCCTCGAGACCGAGTGGGGATTCATCATCAAATTCTGCAAGATATTGGAA
TACTGGCCTGCAAGGGGGATGCTACAGATATTTGTTGCTGTCATGACGAAGGCATACCCA
AACGTTGAAAGGAGCGATCTGATTTTGCTTCAGGACATTGCCAGCTATCTGCTCCTTGCA
TGTGGACTAATCTATGTAATCTCGGTGAGTCTAGAGAACTTTGGGTGTTAGTCTGTGTCC
TGTTATAAACTATGATGCCTTTCTATCCTGAAAGTTAAAATTCAACAAAAAAAGCTGAAA
ATTAATTTTGTTAGCAAAATTTGATGCCATGTAATTTTGT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_4480.1	1231	0.0	571 - 1135	100	565 / 565	CUST_11082_PI390587928	ABC13287 ABC24126
MLOC_4480.3	1208	7e-129	506 - 755	100	250 / 250	None	ABC13287 ABC24126
MLOC_4480.2	708	1e-76	512 - 667	100	156 / 156	None	ABC13287 ABC24126
MLOC_4480.4	838	8e-54	495 - 609	100	115 / 115	None	ABC13287 ABC24126
MLOC_4480.5	1014	1e-52	469 - 581	100	113 / 113	None	ABC12425 ABC13287 ABC24126