barSeed - Barley Seed Development Database

Probe ABC13256

Source Contig ABC13256

barSeed

Links

Affymetrix Source Sequence (1041 bp)

>ABC13256 1041
GGTCCGTCTTCGCCACGGCCCTTCCACCAAACCCCGTGCACTCTTCGCCTCGCAGTCAAG
CTCCTAGCGCGCGACCATGGCAGCGGCAGGAGCCCTGGTCGTGTACAGGGCGGTGTTCGC
CGCGCTCGGCTGCCTCATGGTGGGCACCCTGGTGTACACCTGCATCACCGATGGCTCGCC
GTTTCGCATCGAGCTGCTGACTCCGTGGATCGTGACAACATTGGTTGATTTTTATGTAAA
TATAGCAGCGATTTCGACTTGGGTTGTCTACAAGGAAGGAAATTGGATTAGTTCTATCTT
CTGGGTAGTACTGTTGATTTGTTTCGGCAGTGCTACTACATGTGCTTATATTGTTAGCAA
GTTATTTGAGATAACATCTTCAGGGCTTTCCCAAAATCCGCTTGATCTTTTGTTGCTCAG
GCAAGATAATCTACCCGAAAGGAAGTGTTCTTTTGTTGTCATCGGGAGAACTATTTTCAG
CATTTTGGGCATACTCATGGCTGCACTTGTCACGTATACTGTCATTACAGATGGACTGCC
TTTCAGGAAGGATTTGTTGACACCGTGGATGGCTGCAACCTTAATTGACTTCTATATAAA
TGTCTTTGCAATATCGGTATGGGTTGTTCACAGGGAGTCGACTTGGATCTCAGCAGTCAT
ATGGATATGCTTGTTGATATGCTTTGGAAGCATCACAACATGTGGCTACATTGTGGTTCA
ACTTCTCCAAGTGTCGTACCAAGACCCAGTCTACCATCTGCTACTGAACTCCCATAGCAA
GTATGGAATCGCACCCTTGCAGTAATCGCCGATCCTCTTCTACTAGCTTGGTTAGCTTAC
AGTTGGTGTAAATTTTGCAACATACAATCATTTATGTGGCATTTACCTGATTGAAATGTA
GGAAGATCTGAAAACTCATTGAAGGGGTATGTTCTTGGTACACAATAATGTCACCTATGT
TCATAATGGTTCTTCAATAAAGGGTATACCAGAGTAGCAATAGAAGTTTTTTCTTCGTGG
AATGGAATGATTTCTTAACGA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK359155	964	0.0	4 - 964	99	960 / 961	None	ABC13256
AK356038	1012	1e-67	768 - 907	100	140 / 140	CUST_24695_PI390587928 CUST_24693_PI390587928	ABC13256
AK248597.1	1024	1e-67	747 - 886	100	140 / 140	CUST_24695_PI390587928 CUST_24693_PI390587928	ABC13256
MLOC_37894.2	441	0.0	1 - 439	99	438 / 439	None	ABC13256
MLOC_37894.1	369	0.0	1 - 367	99	366 / 367	None	ABC13256
MLOC_62471.4	766	0.0	162 - 514	99	352 / 353	CUST_24695_PI390587928 CUST_24693_PI390587928	ABC13256
MLOC_62471.2	518	0.0	84 - 434	99	350 / 351	CUST_24695_PI390587928 CUST_24693_PI390587928	ABC13256
MLOC_41467.1	440	3e-104	139 - 344	100	206 / 206	None	ABC13256
MLOC_62471.1	397	1e-67	174 - 313	100	140 / 140	CUST_24695_PI390587928 CUST_24693_PI390587928	ABC13256
MLOC_62471.3	567	1e-67	254 - 393	100	140 / 140	CUST_24695_PI390587928 CUST_24693_PI390587928	ABC13256