barSeed - Barley Seed Development Database

Probe ABC13025

Source Contig ABC13025

barSeed

Links

Affymetrix Source Sequence (1139 bp)

>ABC13025 1139
CTTTTTCTAGGAACCCTCCTATGGGTAGTTTCCAGAACGATATTGAGACGTCTAGGGAGA
TGAATGTGGACGAAGGTTGCAAGGATGCATTATTAACCGGTGATAAGCAGCAAGGAGACA
CCGAGAGTTCACATGGCGTTGATGCCTCCAGCAAGGAGTTAAGCAAGCCGGAGTGCAGTG
GTGGTGCTGGTCAGGATGAAGGGCCTAGTGTGTCTTGTCCCAAGAAGAGGAAAAGACCAA
GCCAGGATCGTGGGGTGAAGAATGTACAAGAAGGAAGCCAGCAATTGGCAACTCTGGCTG
CAAAGCAGGAGAAAGATGATGGCGACAAAGATGAACCGAAGAGGCCTATTGTGACGTCCA
GAAAGTCCAACGGGAAGCAAACTGAGGATAAATCTGATGCACCGAAGGAAGACTACATTC
ATATAAGAGCTCGAAGTGGCCAGGCTACAAACAGCCATAGTCTTGCAGAAAGGGTTCGAA
GGGAAAAGATTAGTGAAAGGATGAAATTTCTTCAGGACCTTGTTCCTGGTTGTAGTAAAG
TTATTGGTAAAGCTGTTATGCTGGATGAGATAATCAATTATGTTCAATCACTACAGCGGC
AAGTCGAGTTTTTGTCGATGAAACTTTCAGCTGTCAATCCAGCACTAGACTTCAACATAG
AACGCATTCTATCTAAGGATTTATTTCAGTCTCAAGGAACTGCATCGTCTACCTTCGGCT
TCTTACCAGACATTGGTCATCAATTTTTGCATCCACCAAAACATTCTCAAGCTGCGTTGC
ACAGCATTGTAAATCCCGCTGATGCATTTGGAAGGGTAACAAATGCTCCGGTAGGATGTA
CATTCAAAGAAGCCACACATCAGGTTCCCAATAATTTCGATGGAGAGTTCCACAACGTCA
TTGGGATGCCTTTTACCCTTTTTAACGACCAAGAATCAAATGGTAAACCTTGAGCAATAG
ATTCCGCAACCGAAGCAAGAGATCATAACGGGCCATGAGATTTCAACAGAACAACATGTG
AGCTTGTTGACACTCTTCTACCAGCTCGCATTTGAGCACCGAAGTATAGCCGTCCAAATT
GCTTAACTGTTGATCTCCCAATACTGGAATCAGCACTTGATATCCTATAGAGGCCCTTT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_65318.2	2004	0.0	483 - 1621	99	1137 / 1139	CUST_15154_PI390587928	ABC13025
MLOC_65318.1	1895	0.0	1178 - 1710	100	533 / 533	CUST_15154_PI390587928	ABC13025
MLOC_65319.1	6744	4e-93	1828 - 2013	100	186 / 186	CUST_15154_PI390587928 CUST_23308_PI390587928 CUST_36648_PI390587928	ABC13025 ABC40649