barSeed - Barley Seed Development Database

Probe ABC12967

Source Contig ABC12967

barSeed

Links

Affymetrix Source Sequence (1267 bp)

>ABC12967 1267
TCACGGTTTCCGCCCCCACACCCCTAAATCCTCCCGACTCGCCATTGTCCCGACCTCCCC
CGCGTCCCTTATCCTATTCCTGTTCGCCCCGCCGCCATGGAGGCCGTGCGCGCGTCGGCG
GCCTGGGTGGCCAGCCGCTCCTCCCACGTCAAGGTTGACATGCTAGAGATTGAGAAGGCC
GTGGACAAAATTCAGGGGAATGTTCCAAAAGTCGAGTGGGATTTCGAAGGAATCCATTAC
TTTGACAATGGACCGCTCACTGTGCAGTACCTCTTCGTCTTGGATGCGCTGAACTTTTGC
TTCTGGCCAGACAAGGACTTGACCTATGACAATTTGGCTTCTGGACTTAAGTTAGCATTA
GAGAAAGATAAGTCAGCACTTGATGCAGATCGTCTGAAGAATTATACTGGACCGCAACTT
CGAGAACTGCTGAATTGGCCACGCCCACTGCCAATTGAGGAGGAAAGAGTCCGCCTTCTT
CATGAGGTTGGTCTGGAGCTTGAAAGAAGCTTTGGCGGTGAGGCTGCTAATCTTGTGAAG
TCTGCAGGAAACTCTGCTGCATCTCTAATTGAACTGATTACCCGTCATTTTCCTGGCTTT
CGAGACCACTCACTTTACAAGGGACACCAGGTTTTCCTGTACAAGCGGGCCCAGATATTT
GTTGCTGATTTGTGGGGTGCTTTCAAGGGGGAAAACTATGGACAGTTCGACGACATTAAG
TCCATCACCATATTTGCCGACTATATTGTCCCTGCTGTGCTGAGGGAGCTTGGCATACTG
AAATACGAGTCGAGCCTATGTTGCTCCATCGACTCGAACCGCGAGATTGTGCCCGGAAGC
GAAGAGGAAGTGGAGATTCGTGCTTGTTCTGTTCATGCCGTTGAAAAAATGAGGGAGCTC
ATCAACAAAAAGTTTGGGAAACAGCTTCTGAGCATTGACATTGACCTCTGGCTCTGGTCG
GTAGGCGTTCAGAACATGGCGCTGTCTCATCACCGCACCCTCTCCATTTACTACTGAGGC
TACGCCAGCAGCAGCTGCCACGCTCCCTCTCGGCGCCCGAAGATGGGCCGCGTCTTGGGG
GTCTCCTTTAGCTGCTGTTACATATGGATACTGAAATTTTCCCCCTCTCCGAGGAGTGCA
CAAAAAGTGCAAACTGTTGCTACCGTAGGGTCATCAAGATTTACAGGTAGAACTGGTGTT
ACTGCGTATTGTGGTGGTAGTCCCAACTATCTGTGCGTTTCATCTAAAACAAAAAAAAAA
AAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK374727	1381	0.0	64 - 1317	99	1253 / 1254	CUST_28575_PI390587928	ABC12967
MLOC_70219.1	1255	0.0	1 - 892	100	892 / 892	None	ABC12967
MLOC_70219.2	576	0.0	1 - 575	100	575 / 575	None	ABC12967
MLOC_57045.1	485	9e-175	58 - 390	100	333 / 333	CUST_28575_PI390587928	ABC12967