barSeed - Barley Seed Development Database

Probe ABC12900

Source Contig ABC12900

barSeed

Links

Affymetrix Source Sequence (670 bp)

>ABC12900 670
CAGCCAACGACGACAATTCCACCTCACCAGCCAGCTTCATCCGACTCGCACCTCCAACTC
AATCCCCCTCGCATGGTGGACCGCACCACCCACCTTCGTCCTTCGCTCCTCCCCGCAGAG
CAGCACGGCTACGCCCCAGTCCACTCCACCAATGTTGTCCCCGTGCGATTCTGTGGTGTT
TTCTCAGTCGCTAGGCTCCCCCATCTATTGAATCAGATGCATCCCCATCGATTGATTCGG
CCGGCTGGAGAACATTATTTCTGGATTGCATAATTGCGCCCCTATTTGAAGGAAGGCATC
TCCAAAGCAAAAGGTATGCACACTTCATGGACTGCCCCACATTTGGAGATTTGCAATTTT
AGCAACGGATTGTGTGTGTGTGTGTGTGTGTCTTTTCGCCAAAAAAAAAGATTGTTGTTG
TGTAATTCATGTGTTTTTATTTCATGTTTGTGTAGATTTTAGTTGATGGAAGCTCATAAA
AACTCCGATTAGGGTAGATGAGACCCGCTTGTAGATAATAAATTTCGGCACCCGGTTGTT
AGGGGCAAGCAGGCTATTTTGCAATCTCAAATTTATGTATTTCCAATGTATCTTCCTTAT
GCACCGATTTCAGAGAATTAGTGCTTCCTATGTACAGAAGGAATTTTTCCATACCGCTTC
TTATATATAT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_284.1	2420	0.0	2045 - 2420	100	376 / 376	CUST_39723_PI390587928 CUST_29458_PI390587928	ABC06707 ABC12899 ABC12900
MLOC_284.2	2711	6e-164	2019 - 2331	100	313 / 313	CUST_39723_PI390587928	ABC06707 ABC12899 ABC12900
MLOC_284.3	1364	6e-164	1012 - 1324	100	313 / 313	None	ABC06707 ABC12899 ABC12900