barSeed - Barley Seed Development Database

Probe ABC12824

Source Contig ABC12824

barSeed

Links

Affymetrix Source Sequence (1101 bp)

>ABC12824 1101
GTGACCCTCTTCACTTCCTCAAGAAGTCACGCACCAAACACCACCCCCCATCACCGCCGC
TCCGCTCCCCAGTCCCCCACCCCTCCTCCGCCCCCTTCCTCGAGCCGAGCTCCGGGGGAA
GGAATCGGAGAGGCCGGCGCGCGGCGAGCCATGGCGTCCAGCGCCTCCCGGTTCATCAAG
TGCGTCACGGTGGGCGACGGCGCCGTCGGCAAGACCTGCATGCTCATCTGCTACACCAGC
AACAAGTTCCCCACCGACTACATACCCACGGTGTTCGACAATTTCAGCGCGAACGTGGTG
GCGGACGGCACCACGGTGAATTTGGGCCTTTGGGACACCGCCGGGCAGGAGGATTACAAC
CGGCTGAGGCCTCTAAGCTACCGCGGCGCCGACGTTTTCGTGCTTGCCTTCTCCCTTGTG
AGCCGAGCTAGCTATGAGAATATCATGAAGAAGTGGATACCGGAGCTTCAGCATTACGCG
CCCGGCGTACCTGTTGTGCTGGTAGGCACAAAACTGGATCTTCGTGAAGATAAGCACTAT
TTGCTGGACCACCCTGGGATGATACCCGTTACCACAGCACAGGGGGAGGAACTTCGTAAG
CAAGTTGGTGCTTTATATTACATAGAGTGCAGCTCAAAGACACAACAGAATGTCAAAGCT
GTGTTTGATGCTGCTATCAAGGTAGTAATCCAGCCCCCAACTAAACAAAGAGAAAAGAAG
AAAAAGAAACAGCGTCGGGGATGTTCTATGATGAACTTCAGCGGAAGGAAAATGCTATGC
TTCAAATCCTGAATGATGAAGGAGAAGGTCCCTTGCCTGAAGCGATTGTCACGGTTGCGC
TGCACCAAATTGACAAACACTCCAGACCCGTTGGATGTGCTGATTGCACGGTCAATGTGT
ATATTTGCATCGTTGGTAATTAATTACTAGAGGTAGATGGTTAAACTAGCCCTTGCTTAT
GTACTGCAGAATGCCCGTGTTTTATTAGCATTCGTCGTGTTAGGAAGTCCGTGTAGAAGC
AAACGAGATTTGACTCTGTCAGTGACAAGGTCGCAACTTTTGAAGTCTTGGTGTATTCTC
AGTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_53849.2	1184	0.0	16 - 1100	99	1078 / 1085	None	ABC05202 ABC12824 ABC16088 ABC25552
MLOC_53849.1	1509	2e-130	11 - 266	99	255 / 256	None	ABC12824 ABC25552
AK359559	1015	5e-167	126 - 705	85	493 / 580	None	ABC05202 ABC12824 ABC16088 ABC25552
MLOC_53849.3	1105	9e-100	643 - 840	100	198 / 198	None	ABC12824
MLOC_17869.2	1027	9e-115	332 - 805	82	391 / 474	None	ABC12824 ABC25552
MLOC_17377.2	1246	9e-90	309 - 833	78	414 / 529	None	ABC05202 ABC12824 ABC16088 ABC25552
MLOC_61580.2	909	4e-83	32 - 544	78	403 / 518	None	ABC12824 ABC14069 ABC16088 ABC25552
MLOC_61580.1	880	7e-81	32 - 409	81	309 / 380	None	ABC12824 ABC14069 ABC16088 ABC25552
MLOC_36731.1	1128	3e-80	401 - 941	77	418 / 544	None	ABC05202 ABC12824 ABC16088 ABC25552
MLOC_17869.3	1161	1e-78	598 - 925	83	272 / 328	None	ABC12824 ABC25552
MLOC_17869.5	1304	7e-66	812 - 1068	84	217 / 257	None	ABC12824 ABC25552