barSeed - Barley Seed Development Database

Probe ABC12666

Source Contig ABC12666

barSeed

Links

Affymetrix Source Sequence (895 bp)

>ABC12666 895
CAGGTGCACAGGAGGTGGAAGCTGCAGCTCAGAACAATGCTGCTGAGGAAGAAAATGAGA
GGAAGAGTCATGGCATTGAAGATGAATCAGGACAGACGACTCGAGTTACTGATGAAGAAG
CTGCAGGAAGCAAAGAAATCAATGGGGATCAGATGGATGTGGACAACGCAGATGTAGATG
GAGAACTTGTAGGTCCTATTCCTCCGTTGCCGTATGCTCAAGTGGATAGCGATGGAGCTT
CAGTTGAACAGAGTACCTCCAACGCTCAGCACGGTGACAGCGTTACCAACGTGGAAGCTA
TTGACAAGGTTGATTCATCCAAATTGGATGGTCAGGACAATACCGATGCTAGCATGGATG
TTGATGCTCCTAGCCAGGAAGAGGGAAAAAATGTTCTTCCTGCTCCTGATGTTATTACCA
GTGTAGATGCAGGGAACACACCCCTATCTTCAGATCAGTCTGTCTCGAATGAAGAGAGTG
CCGTGGTCCCTGAATGAAAACATCTTCTGCCGACCTCATCTGCGTGGATGTGACAAGCAC
GATGATGAGAAAGGTGACTACAAACAGCGACGCAGTTGCAAAGTGTGAAGTGTGTACGTG
TAGGTAAAATTGTTGATGGAAGACCCAAGGTGGCCCCAAGAGAAGCAAATTGGATGTTCA
AAGTTGTAGACTAACACTTTCACCTGTGTGCCAATCTTCAGTTTATGTTGGCCTGAACGT
TTTTGGATGGTAGAAACCTGACATTTGCAATTTTTTTCCTAAGGAAAGTATGAACTTGAG
GAAAAAAGAGAGGAGAATGCAGGTATTGTCTATTTGTGCTAGCTACATGCGGCTCGAAGT
TTTTTTTTATTGGGTTCTGTTGAAATCTCCAAAACTCTTGCTTATTTAAAGCATT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_6852.1	1859	0.0	1030 - 1859	100	830 / 830	CUST_23156_PI390587928 CUST_26507_PI390587928	ABC08500 ABC12666 ABC17636
AK252801.1	1985	0.0	1214 - 1985	99	768 / 772	CUST_23156_PI390587928	ABC08500 ABC12666 ABC17636
MLOC_68734.2	2171	5e-126	1545 - 2019	84	404 / 481	CUST_23156_PI390587928 CUST_16169_PI390587928	ABC08500 ABC12666 ABC17636 ABC37701
MLOC_68734.1	2386	5e-126	1685 - 2159	84	404 / 481	CUST_23156_PI390587928 CUST_16169_PI390587928	ABC08500 ABC12666 ABC17636 ABC37701
MLOC_6852.2	308	3e-84	139 - 308	100	170 / 170	None	ABC08500 ABC12666