barSeed - Barley Seed Development Database

Probe ABC12572

Source Contig ABC12572

barSeed

Links

Affymetrix Source Sequence (1112 bp)

>ABC12572 1112
CGCTCATCCTCGTCGCCGTCATGTTCGTGTGGCACCACACCACCGTCAAGAAGTACGAGT
TCGACCTCCACAACAAGGTCACCATGGAGTGGCTCCTCGCGCTCTGCGACAGGCTGGGCA
TGGTCCGCGTCCCCGGCATCGGCCTGGTCTACACCGACCTCACCTCCGGCGTGCCCGCCA
ACTTCTCGCGCTTCGTCACCAACCTCCCCGCGTTCCACCGCGTGCTCGTCTTCGTCTGCG
TCAAGTCCGTGCCCGTGCCCCGGGTGCTCCCCGCCGAGCGCTACCTCGTCGGCCGCGTCG
GCCCGGCGGGCCACCGCTCGTACCGCTGCATCGTGCGCTACGGGTACCGGGACGTGCACC
AGGACGTGGACTCGTTTGAGACGGAGCTCGTCGAGAGCCTCGCGTCCTTCATCCGGCTCG
ACGCGCTGTTCCGGTGCAGCGACGCCCGCAGCGACGCCGACTACGAGCGGGAGAACGCAT
TCACCGTCATCGGCAGCAACCCGCTCCGGCGCCGCATCAGCTACGACGACACCCACGACA
GCGCCTCGTCCGTGGAGATACGCGTGGACAGCATGACAGGCAGCGGGACGAATACCGTAG
AGCTCGCGGCCGTGCCGACGGCGGCGCGGGTTGTGAAGAGGGTGAGGTTCCTCGTGGACC
CCGGGAGCCCCGAGGTGGAGGACAAGCAGATGCTGGAGGAGCTCCACGAGCTGTGCGAGG
CGAGGGAGGCCGGCACGGCCTTCATCATGGGCCACTCCCACGTGAAGGCCAAGCCCGGGT
CGTCGCTGCTCAGGAGGTTGGCCATCGGGTACGGGTATAACTTCCTGCGCCGGAACTGCC
GCGGCCCGGACGTCGTGCTCCGCGTGCCGCCGGCGTCGCTGCTCGAGGTCGGCATGGTCT
ACGTGCTGTGATTCACAGACACGGGGCTTCTGTTCTGTCTCTAGCTTCCGGACATGCTGC
TGTAAATTGTAACGTGACGGCCGGCATGACGCGTGATGGAAATCTTTTATGTTTTGATTG
ATGAAATGCAAGCATCGTATGCGGTCGCCGGGTGATAATGTAGAAAATTAACAGATATTG
TGAACCTTGCAAAAAAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_74565.5	3112	36 - 1128	100	1093 / 1093	CUST_25736_PI390587928 CUST_39194_PI390587928	ABC12572
MLOC_74565.4	3870	36 - 1128	100	1093 / 1093	CUST_30639_PI390587928 CUST_25736_PI390587928 CUST_39194_PI390587928	ABC12572
MLOC_74565.6	2940	13 - 1105	100	1093 / 1093	CUST_39194_PI390587928 CUST_25736_PI390587928	ABC12572
MLOC_74565.3	2991	48 - 1140	100	1093 / 1093	CUST_25736_PI390587928 CUST_39194_PI390587928	ABC12572
MLOC_74565.1	3553	50 - 1142	100	1093 / 1093	CUST_39194_PI390587928 CUST_25736_PI390587928 CUST_30639_PI390587928	ABC12572
MLOC_74565.2	3819	50 - 1142	100	1093 / 1093	CUST_39194_PI390587928 CUST_25736_PI390587928 CUST_30639_PI390587928	ABC12572
MLOC_74565.7	2552	1 - 1036	100	1036 / 1036	CUST_25736_PI390587928	ABC12572