barSeed - Barley Seed Development Database

Probe ABC12547

Source Contig ABC12547

barSeed

Links

Affymetrix Source Sequence (653 bp)

>ABC12547 653
CCCAATGGGCTGCTGACAACGCTCACCGGCTGCGGGTGGAGCGGGACGACTCGTCCGAGG
ACGAGTCGATTGAGACCTCCTCAGGCTCTTCCGAAGAGGCCGAGAAAGGCGGAAAAGCTT
CTAGTCTGTTGGGCAGGTTCATGTGATATCGTCACCCGACTAAAGCTGCTTTTGCGGACG
ATGTGTATAAGGTAGGATTGGGAACTTGGTAGCAGTAGCTAGTAGGAGGTGGAAGTTCAT
CGTCTCCACGCGGTTCGCCATTGCGGCAGAATGCTTGGTGACTGTAGGCTGTTAGCTGGT
TGGTTAACCACCGTCATCCATCTCAATTCGACAACTGATGTTAGGTTTAGCCGGCAGTCT
GCCATCCATGGATCTTTAAGTTTTAGCCGATGCATCAGGGGACATGGGCCGGTGCCATTC
GATGGATTAGGGACCTTCGATCCTGTCGGGATCTTGCCATTGTCTTGTTGAACATCTCAT
GTTTCATTCTCAGGTGTGAGGGTAGCATTTCAAGGATCTTTATCTGTTGTTAGCCAGGCA
TGTAAACCAGATTGTTTGGGCATGTAGATCAACTGGAGTTGGTTGCTGTAAACCGTTCGC
TGGACCCACACACACACAAAAAAAACCGTTTTTTGGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_38387.1	1984	0.0	1375 - 1984	100	610 / 610	CUST_33458_PI390587928 CUST_28580_PI390587928 CUST_5634_PI390587928	ABC09264 ABC12547 ABC26240 ABC47626
AK375292	2079	0.0	1506 - 2055	95	541 / 567	CUST_28581_PI390587928 CUST_5634_PI390587928	ABC09264 ABC12547 ABC26240 ABC47626
AK373999	1880	2e-119	1586 - 1880	93	289 / 312	CUST_28581_PI390587928 CUST_5634_PI390587928	ABC09264 ABC12547 ABC26240