barSeed - Barley Seed Development Database

Probe ABC12434

Source Contig ABC12434

barSeed

Links

Affymetrix Source Sequence (987 bp)

>ABC12434 987
CTTCCCGACCCGCTCGTCCGACGACGAGGAGCACTACGAGGACGAGGAGGACGGGAGCGG
GGACGAGTGGGGCGGAGGACGACGAGGAGACGCCCGCCGCGAAGCCGCCCAGCGGGAAGA
CGGAGGAGGAGAAGCTGGCGGAGGCGGACGAGATCGGGTACAAGGTGGTCGGCCCGCTCG
GCGCCGACGAGAAGCCCTTCAAGCCCTACGAGCCCGTCTTCGCCGTCGTCCAGATTGGTT
CGCATCAGTTCAAGGTGAGCAACGGCGACTCCATCTTCACGGAGAGGCTCAAGTTCTGCG
ATGTGAATGACAAGTTAGTTTTAAATCGAGTTCTCATGCTTGGCTCACAAGCCCAAACAA
TAATTGGGAGGCCAACTCTTACTGATGCTACTGTTCATGCTGTCGTCGAAGAGCATGCTC
TAGATGCAAAAGTTATTATATTCAAGAAGAAAAGGAGGAAAAATTACCGCCGAACAAGGG
GACACCGTCAGGAATTGACAAAGCTGAGGATAACCAACATCGAAGGAATAGACAAGTCCT
TTATTCAACAAGAAGGAACAGATAAGCCAGAGAGTGTCGCTGTTGCTGCTTAAATTAAGA
CGATGAATCAAGGAAGGTTGCTGTTTTGTGTTCATGTCGACAATACCAAGCGATCCTTGA
TGCTGGTGTTGCACATTCCTCGATCAATTCTAGATACGCGTCTGTTGCTTTTGTTCTCCT
TAACTAATTCAAAGATTTGAGTCGAAGCTGAAGGCCCTGTTTCTGTATCGTCATTTTAAC
GCACAAGCCTCTCGAGCTATGCCTCTCATGTAATCAGCTCCAGTGTCTTGATAAGTTTAG
AATCTGGATACCCTGGTGTGGATCAGCTCCTGTAGTTTATAGAGCTACACTGATTTTCCA
TTTCTTGTTTCCTTCACCATACGCTGTTGAATGTGTTCTGATACACATCCCTGCCATGTC
CACTGTCTACTCTTCAATGCATAAATA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_77105.2	1005	0.0	1 - 867	100	867 / 867	CUST_10783_PI390587928	ABC12434
MLOC_77105.1	568	0.0	1 - 383	99	382 / 383	None	ABC12434
MLOC_1720.2	340	1e-143	28 - 340	96	302 / 314	None	ABC12434
MLOC_1289.1	221	2e-96	4 - 221	96	211 / 220	None	ABC12434
MLOC_1720.1	191	1e-73	29 - 191	98	160 / 164	None	ABC12434