barSeed - Barley Seed Development Database

Probe ABC12300

Source Contig ABC12300

barSeed

Links

Affymetrix Source Sequence (1307 bp)

>ABC12300 1307
GCTTCCTCATCTCCTACTCTGATTCAGCGGACGCCCGGCGGCCGGGGACCGAGATCCACT
GCCTTGGTGTGGCCAAGTCACCATGTGCCTTGCCCTCTACCATCCAGCGTCCAAATCAAT
CGCTGCTAGCCATGGGATTAATTTGAACGATGGATGCAGGGGCACGAGGCACGCCGTGAC
CCGGCTCTGTCGAGGCATGGGATCTTAGTCCGGCGGGCGGTGGCGGAAGCATCACCATGA
GCCGAGCAAGCAGATATGTCACAGACAAGAATCTCTATAAGTATTTGAAGCATCTTTCCT
ATCGAATGTTGTAAATACATCTTTATGATGCCAGGGCTACTGACAACCAGTTCAAGTTAA
GTTGCTTGATCTCCACTCCAGTTGGACCGGTTAGTTGATTACAGATTTGAGGATGCCAGT
TATTCTGTAATTTGCAGGGACCTCCAGATCTTTTTGGCTCTCGAGTCCATACTTCAAAGT
TAAACCCAGGACTAACATAGTTTGGTGAGGTGATTATGAAGAGAGTATGATGAAACAATT
ATAATAGCCAGAATTGATTATTCATTGATTGAGCAGAGGAGGCAACTTATTACTCTCTGA
CATCAACGACGTGGAGATCATTATCAGTTGGTAGATGTGATCCGGTTCTATGTAGACTGT
CCTGACTGCTCGGCCACATAATGTGTGAAAAGGGGGCCAAAAAAACAAAAACGAGATATG
TAATGATGCCAACAAAATAACTACTAATGATGAAGAAGGCTTCATAGATTGTGATGATGT
TGGTGCAGATGAAAATGAAGATGCTGAAAATGCAAAAACAAACGGGTGCAAGTAGTGGAA
GCTGAAATATATTTGGAACCTTCCAAAAGAGAATAGGATAATGGTTCGCAGCAATGACCT
TCCAAATATTTTTTTGCACACAAGACCGAGAAAACAACAAAAGGTGCTAATGCAGCTATC
AGACTGCTCAAGGTGGTTTGCTTAGTTGGTTGGGTGCTAGTGAACTATATGTTCAAAAGA
TAAATGGATGAGTATATATGGGTGGGTGGCAAGTATACTTCAATGAGGATGTTGATTTTC
TGGATCATGGTGATGATGATGGATGATTTCAGTTTTATTTAAGTAGTAGGGATGTCGTTC
CCGTTGGATGTTGTTTGTCGGTCTTGTTTTGGTTAAGTTGTAGGGATGTTGATGGATGCT
TTCAGTTTAAGTTTCACTGGCAAGAAAATAGTTAGATTATGCATCACATTTGGATGATGT
TCCTCATGTAATTTCCAATATTGTAATCTAACATTTTTATGTAATAT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK250866.1	759	5e-63	184 - 315	100	132 / 132	None	ABC12300
AK249301.1	4111	2e-57	3842 - 4095	83	212 / 256	CUST_19115_PI390587928 CUST_9812_PI390587928	ABC12300 ABC24674 ABC35191
MLOC_13145.1	444	2e-51	18 - 289	80	221 / 275	None	ABC12300 ABC35191
MLOC_13144.1	402	2e-51	18 - 289	80	221 / 275	None	ABC12300 ABC35191