barSeed - Barley Seed Development Database

Probe ABC12058

Source Contig ABC12058

barSeed

Links

Affymetrix Source Sequence (643 bp)

>ABC12058 643
CTGCAGGCGCCACCAAGCAGCAGATGATCGACTGCTACATCCAGACCCTCGCCAAGGTCC
TCGGCAGCGAGGAGGAAGCCAGGAAGAAGATTTACAATGTCTCCTGTGAGCGGTACTTTG
GTTTCGGGTGTGAGATCGACGAGGAAACATCCAACAAACTGGAAGGAATTCCTGGTGTTC
TGTTCGTGCTTCCTGATTCTTATGTTGACCCAGAGCACAAGGACTATGGAGCTGAGCTTT
TTGTGAATGGAGAGATTGTTCAGAGGTCTCCGGAGAGGCAGAGAAGGGTAGAGCCTGTGC
CGCAGAGAGCATCGGATAGGCCTAGGTACAACGACAGAACCCGCTACCAGCGGAGGAGGG
AGAACCAGCAACGGTGATGAGCCGAGGTGCCCGAATGAAGATCAAATAACAAGCCCTGGT
GGTTTCCGCCGGGTATAAATATCAACTACGGGATAGAAGAACTGCATGTTCACTGTATGC
CAACACAAGGTGTTTTCTTTTCTTCAAGTTGGTGCTCGTGCGTCTTGGATGTATCAAACT
AGTTGTTAGAGAGCTTGGAACTATTTGGAATTGCACGTTACCGTTAACTCTGCAGTCATG
TGCGCTTGTAAATCTGGTTTGATGGATAAACTGCTACTTTTGC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK356453	1064	0.0	396 - 994	97	584 / 599	None	ABC02392 ABC12058 ABC24791
MLOC_39227.1	2334	2e-173	341 - 715	96	361 / 376	CUST_9122_PI390587928	ABC12058
AK370494	1015	8e-128	443 - 807	89	327 / 366	CUST_7771_PI390587928	ABC02392 ABC12058 ABC24791
MLOC_77390.1	288	2e-88	1 - 186	98	183 / 186	None	ABC12058
MLOC_77390.2	155	5e-70	3 - 155	98	150 / 153	None	ABC12058