barSeed - Barley Seed Development Database

Probe ABC11859

Source Contig ABC11859

barSeed

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Affymetrix Source Sequence (693 bp)

>ABC11859 693
GAGAGCCCGATATTTCTTCTGGATGCGTTTACCAACCTTATCGTTTACTATTCATCGACG
GCTGATCCTTCACTTCCTTTTCCTCCACCCCATGACTGTCTTTTGAGAACAAAGATTAAC
GCGCTGAAGCAGGACAGGTGTATCACACCAAAGCTTACGTTTGTGCGTGGAGGACAGGAC
GATTCGTCACTGTTTGAGAACTATCTTATTGAAGAGCAAGATGTTGATGGTTCGGGGTAT
GCAAGTGGTAATGGTTTTATATCATTCCGTGAGGGTATAAGGAATGAAGTGGCAGAAATC
CTCAAGGAAGAAAGTGGCAGCTAGCTGCCTAGCTTCTGACTGCTATGGCCCTGTGGGTTC
CGAAGATGGTGTAGATTGTGTCAAGAGCTCCTTGTTAACCTTTTGGCGTAGACTGTTAAC
TTTACTCGCCTAAAATTGATAGAGATATAGTCATGGAGTAATAAGGAGGGGAGGTTTGTT
TTCATCTTACAGTAGTTGCTTGTGTCAATACCAGAATAGCTCAATGTTGTAGGGTGGTCT
TTCAGAGTAAAACCTTCTATTCTTCTATTTACTGTACATCTCATATCGGTTGCTTTTTCA
CCTTTTCTGACAGTAGCAAAGATACTCATGAAAAGGATATCACATTAGTTTTACAGTAAT
GCAATATACCGCTGGGGGCTTGCCCAGAACAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK366302	2703	0.0	2006 - 2695	100	690 / 690	CUST_39023_PI390587928 CUST_21408_PI390587928	ABC11858 ABC11859
MLOC_15606.3	2601	0.0	1907 - 2596	99	688 / 690	CUST_39023_PI390587928 CUST_21408_PI390587928	ABC11858 ABC11859
MLOC_15606.2	2343	0.0	1993 - 2343	99	349 / 351	CUST_21408_PI390587928	ABC11858 ABC11859
MLOC_15606.1	2534	5e-150	2241 - 2534	99	292 / 294	CUST_21408_PI390587928	ABC11858 ABC11859