barSeed - Barley Seed Development Database

Probe ABC11825

Source Contig ABC11825

barSeed

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Affymetrix Source Sequence (669 bp)

>ABC11825 669
GGCACAGCACACCTCTCCCTCCCACAGCTTCTGTATACAGAGCAAGAGCTTTCACTACGT
CCTCTTCTGCTAAGCTCAGCCAGCTTTCCCTCCGTCCACCACCACCACTACTCCAATGGC
TCGCTACGCCGTGGTCGCCGCCATCGTCGCCGTCCTGGCCATCACCGCCGCCGCGCAGGG
CCCCACGCCGGCGCCCAAGATGGCCCCGCTGCCGGCGCCTCCGACGAGGTCCCCCCCGGT
CGCCACGCCGCCGACTGCATCGGCGCCGTCCCCGATGGCCTCTCCCCCGGCTCCGCCCAC
CGACGCCCCCGTCGGCGCTCCTTCCGCGATGACGCCTTCCTCGGTCTCCGGCACCCCCAT
GGGCGCACCTGCCGGCGCACCAACCGGCACCACCCCCGCCAGCTCCGCCGTCTACACCTC
CTCCGTCAGCTTCGTCGCCGTCGCCGGTGCCGTCGCCGCCGCCGTCCTGTTCTAGATGCA
GCGGCCCTCGCTCGACCGCCGCGGGAGTGCCACTCTGTTTTATTGCTAGTTCTGTTGTTT
ATACAACGAGATTCATTTTCTAGAGGCTGCGGAGAGTGACATGACACTGCCATGTTATCT
TGTTACATACTGTGCGCTCGAGATCATTATTAATGGAATTCTTTCATTTGTTAAAAAAAA
AAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_64151.1	1040	0.0	283 - 934	99	651 / 652	CUST_6548_PI390587928	ABC11825
MLOC_64151.2	803	1e-96	518 - 715	99	196 / 198	CUST_6548_PI390587928	ABC11825
MLOC_64151.3	703	1e-110	124 - 340	100	217 / 217	CUST_6548_PI390587928	ABC11825
AK366887	674	9e-78	105 - 459	82	305 / 373	CUST_30858_PI390587928	ABC06015 ABC07498 ABC11825