barSeed - Barley Seed Development Database

Probe ABC11708

Source Contig ABC11708

barSeed

Links

Affymetrix Source Sequence (1153 bp)

>ABC11708 1153
GGTGCTCCTAACCGAACGGACGAAATAGACCACAACTCGAACTCGCAACTCACCTCGGCT
CGGCTCGCTCCTCCGTGCAGGGTACCTGATCCCCAAGGGCTGGAAAGTGCTTCCCCTGTT
CCGGAACATCCACCACAACCCCGACCACTTCCCCTCCCCCGAAAAGTTCGATCCTTCACG
ATTCGAGGTCAGCATCATCACATCTTCTTCTTCTACTGTTTTTTTTATCCTTGGATGATG
ATGATGATGATGATGATAGGCTTGAGAGTCCCCCGTTGTTCATTAGCTGATTGCGTTTTT
GTTCTTGGTGACTGCAGGTGGCCCCCAAGCCCAACACGTTCATGCCGTTCGGGAACGGGA
CCCACTCGTGCCCCGGCAACGAGCTGGCCAAGCTGGAGATGCTCGTCCTCTGCCACCACC
TCGCCACCAAGTACAGATGGTCTACCTCCAAGTCCGAGAGCGGCGTGCAGTTCGGCCCCT
TCGCCCTGCCCATCAACGGCCTCCCCATGACCTTCACCCGCAAGGCCTGATCTATGTCTT
CCTCCTTCGGAAAATCAACACCACGATAGAGGCAACGGCGTGGCGCATGCGAACCGGATC
GGTTCTCCATCCGTCAGTGTCCGTGCCGGTCGCCGTCGGAGGGGACACTTGTAGCGGTGG
GCGCCGCGGCGGGAGCTGGCGATGGATCGGATCGGAGCACGGACCGTCAAAGTCCTTTGT
ACAGATTCTTCTTCAGCTAGGACCATGACGGCCGGGCGAGACAAGACCAGGAAAAATTCC
TGCCCTTCACAAACACACACCAGTCAGTGGTAGCACTACGTAGGCATTCTCAGCTAGGGA
GATCCGGCGCCACAAAGAAGTGGCGCCCAACTGTAAAACCAACCATTTTTTATCCTTTTC
TTTCAGTTTTTTTATTTTTAGTTTTTGGCAACACCTATAGGAGGAGAGAAGACAGCAGAC
TGACAGGCCCTGATTGGGATGTAAGATAGGTTGCCCGCCTGAAAGCAGGCTGGCAGCTAG
ATCGAATAATCAATCAATCCATCGATCGACCGCGGCAAGGGCCAAAAGGAGGCCCCCGGG
AGAGCGACCCCTTTGTATTGTTTGTTACACGTCAATGCAACTGGAAATTGGCTTTCAAAA
AAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_4786.3	910	0.0	41 - 908	99	866 / 868	CUST_8195_PI390587928	ABC11708
MLOC_4786.2	945	0.0	82 - 945	99	863 / 874	None	ABC11708
MLOC_4786.1	2422	2e-51	1470 - 1580	100	111 / 111	CUST_8196_PI390587928 CUST_33878_PI390587928 CUST_8195_PI390587928	ABC11708