barSeed - Barley Seed Development Database

Probe ABC11665

Source Contig ABC11665

barSeed

Links

Affymetrix Source Sequence (1469 bp)

>ABC11665 1469
CCCTGAACCTCCGCGTCGCCATTTCCCCCTCCAGACCGCCGCGATGGCCGGAGGCGGCGG
CAAGCCGTTCGGGGACAACGTGTTCGCGGGCCACGCTGCCGCCGGAGCCGCGGCGATCAG
CGCCTCCGCGGTCGCCGTCCACCCCCTCGACACCGTCAAGAGCCTCCTCCAGTTGAGCGC
GGCGGGGCAGAAGCAGAAGATGGGGCTCCGCCAGGCTGTGGACCGGCTCATGCTCGTCTC
CGGCCCCGCAGGTCTTTACAATGGCATTGGATGGTCAATATTAGGTAAACTGCCTGGTTT
GGGAGCACGTTTTGGGACCTATGAGCTTTTAACAGCCTTCTATAAAGATGGGAGGGAGGA
TAACCATGTTAATTATTCTGAGGCTATGTTGGCTGGCATAACTGCTGGTGCTGTAGAGGC
ATTTGTGTGCACGCCATTTGAACTTCTCAAACTTCGGTCCCAAGTTGGTTCTGCCATACC
TATGAAAGCTACGAACCCTGCTAATGTTATACAGGAGTCGTTTCCACTGCTTTCCAAGCT
ATTACCTGGTTATGTCCCTGACATAAGAGTATGGAATAGCAGTGTCAGTCTGTTGTCCAA
TCTTTCCCCCAAGCATCCTGACATGATGGGTGCCCTGAAACAGCACCCGTGGATTCTGAC
TGGCTCTGGGAAGCCCCCGTTACCCTCTGATGTTCAGGTGCCTTTGAGAGTGATAGCACT
TGAAGGATGGGGTGCTTTATGGAGAGGGCTTAGGCCAGGGATAGCCCGAGACTGTGTCTT
TAGTGGAATGTTCTTTTCTTGTTGGCAATTCATACATACGGCGATGCTTACTTGGAGGTC
TGTTAACATGAACCCTGAACCCAGGAATTTAGAAGAAGCAGGCCTTGTGCCCCCTTTAGC
TTCTAGTCTTGCTGCAGGCTTCTCTGGAGTTGTAGCAGCTGCTGCTTCACACACGTTTGA
TACTGCAAAAAGTCGTTCACAGTGCACTGTGATACCTAAGTATATAGCAATGGAGAGGAG
GTTTCTTAAATGGAGAGCACCAGGAATGTGGATAGAGAGAATGACAGGAACAACACCTGC
TGATAGGAATGTTCTCTTTCGTGGCATTGGGCTACGGATGGCGCGCAGTGGAATCGCATC
TTTTGTACTTGTTGGGTCCTACTATTTAGCCGTAGATCAGCTCTTGTAGATGGCAGGCAG
AGAAACCATTTATGAAATTCAAACACCTTGATTATATGCATCTGCTGAACAACCAGAGAA
GAGGTAACTATGTGGTACCCTTTTCGTCTCATCCAGACTTAATTGGAGCTGTGTGCTCCA
GGATAGAGTTTTGGTTACTAATGTACATGTTTATAACAACCGGAATTGAAGGTTCGCCTT
CAGTTTTGTCGCTCGTGTTGAAGAGATGTGAAAGTATTTTGGCAGCAGTGAGCAAATAAA
AGGGCCTTTGATAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_51720.1	6425	0.0	4936 - 6389	99	1451 / 1454	CUST_18276_PI390587928 CUST_3734_PI390587928	ABC07577 ABC11665
AK374288	1305	0.0	51 - 1305	99	1253 / 1256	None	ABC11665
MLOC_51720.4	1169	0.0	1 - 1168	99	1167 / 1168	None	ABC11665
MLOC_51720.3	1960	4e-179	1574 - 1920	99	345 / 347	CUST_3734_PI390587928	ABC11665
MLOC_51720.2	3512	3e-65	691 - 829	99	138 / 139	CUST_3734_PI390587928	ABC11665 ABC19347