barSeed - Barley Seed Development Database

Probe ABC11318

Source Contig ABC11318

barSeed

Links

Affymetrix Source Sequence (906 bp)

>ABC11318 906
GCGCCCTCGCATCGCCGCCGAAACCCATCGCTCTCGCTCTCCGCCCCGTCGATCCGCTCC
GACGCCAGCGCGGGTTCCTGCTCCGGAGGTTTCGGCCGAAATGGCTCTCCCCAACACCCA
GCCCGTGGACTGCCCCAACTTCAAGCTCGTCCTCGTCGGCGACGGCGGCACCGGCAAGAC
GACGTTCGTGAAGAGGCACGTCACCGGGGAGTTCGAGAAGAAGTACGAACCCACGATCGG
CGTGGAGGTGCGGCCGCTGGACTTCCAGACTAGCCACGGCAAGATCAGGTTCAGCTGCTG
GGACACGGCCGGACAGGAGAAGTTCGGTGGCCTCCGTGACGGATACTACATCCATGGCCA
GTGTGCAATCATCATGTTCGATGTCACCTCCCGGCTGACCTACAAGAATGTTCCCACCTG
GCACAGAGACATCTGCAGGGTGTGCGAGAACATCCCGATCGTCCTGTGCGGCAACAAGGT
GGACGTGAAGAACCGGCAGGTGAAGGCCAAGATGGTGACCTTCCACCGGAAGAAGAACCT
CCAGTACTACGAGATCTCTGCCAAGAGCAACTACAACTTCGAGAAGCCTTTCCTCTACCT
TGCCAGGAAGCTGTCAGGGGACATGACCCTCCGGTTCGTCGAGGAGACGGCCCTCCTTCC
CGCCGACGTAACCATCGACCTCGTTGCTCAGCAACAGATTGACGCAGAGATAGCTGCTGC
GGCGGCATTGCCCCTCCCGGATGACGATGATGACAACATCATGGACTGAGCTGATCAATC
GGAGGATGTGCCTAGTTTAGTAGCAGCATCTATAGTTTCAAACTCTTATAAGAAGTGAAG
TGAAACTTCTGTATCCGTATCAGACTTTCAGTAGGCATTTGATGACGATGGTTTGGCTTG
TTAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_10456.1	1198	0.0	290 - 1196	99	903 / 907	None	ABC11318
MLOC_10456.3	1013	0.0	87 - 997	99	903 / 911	None	ABC11318
MLOC_10456.4	1039	0.0	85 - 1004	98	903 / 920	CUST_12833_PI390587928	ABC11318
MLOC_10456.2	1099	3e-94	908 - 1099	99	191 / 192	None	ABC11318
MLOC_19772.1	1306	3e-119	512 - 1002	82	405 / 491	CUST_7309_PI390587928 CUST_1386_PI390587928	ABC01812 ABC01813 ABC11318
MLOC_19772.2	1551	3e-119	757 - 1247	82	405 / 491	CUST_7309_PI390587928 CUST_1386_PI390587928	ABC01812 ABC01813 ABC11318 ABC34623