barSeed - Barley Seed Development Database

Probe ABC10767

Source Contig ABC10767

barSeed

Links

Affymetrix Source Sequence (1123 bp)

>ABC10767 1123
ATGGCCGTAAGCGGCTGTCCGCCATCGGGCGCTCCGGCTCAGCTCACGACGACTACGGCT
TCTCCGCCGAGATACAGACGCTGGGGCGGATCCGGCACCGCCACATCGTGCGGCTGCTCG
GGTTCGCGGCCAACCGCGAGACCAACCTCCTGGTGTACGAGTACATGCCCAACGGCAGCC
TCGGCGAGGTGCTCCACGGCAAGAAGGGCGGCCACCTGCAGTGGGCGACGCGGTACAAGA
TCGCCGTCGAGGCGGCCAAGGGCCTCTGCTACCTGCACCACGACTGCTCGCCGCCGATAC
TGCACCGCGATGTCAAGTCCAACAACATCCTCCTCGATACCGACTTCGAGGCGCACGTCG
CCGACTTCGGCCTCGCCAAGTTCCTCAACGGCAATGCCGGCGGCTCCGAGTGCATGTCCG
CGATCGCCGGTTCCTATGGGTACATCGCTCCTGAGTACGCCTACACTCTCAAGGTGGACG
AAAAGAGCGACGTGTACAGCTTCGGCGTGGTGCTGCTGGAGCTCGTCACCGGACGCAAGC
CGGTGGGCGAGTTCGGGGACGGCGTAGACATCGTGCAGTGGGTGCGGATGGCCACCGGGT
CGACCAAGGAAGGTGTGATGAAGATCGCCGACCCCCGCCTCTCGACGGTGCCCATCCAGG
AGCTGACGCACGTCTTCTACGTCGCCATGTTGTGTGTCGCCGAGCAGAGCGTCGAGCGGC
CTACAATGCGGGAGGTCGTGCAGATCCTAGCCGACATGCCGGGGGCGACGTCGATGACCG
TCGGTACGCGATCCGAAGCCACCGTTGAAGTTGAGGAGGAGCATCAGGACGGGACACAGG
ACTCCCCGGCGCAGCAGGATCTCCTCAGCATTTAGTGGCTGTACCTTGTCGCAGCCCCTG
TACCTTGTGGTGTACTCTTCGGAATGTGGTGGCGTGTCCGGATGCGTGTGAAGGCATGTG
CTAGATTAGTGGTATGATAATGTTGTTGATTAATTAGACCAGTGTAATCTCTGTAGTAGT
AGCAGCAGCAGCAGTAGTGCTGCCTTGTACAAAGCGGTTAGCGGGTCTCGTCTCTCCAAT
TGAATCCAAGTGATTTGTTTCTAAAAAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_60733.2	3370	0.0	2259 - 3362	99	1099 / 1104	CUST_31248_PI390587928 CUST_767_PI390587928 CUST_24758_PI390587928	ABC10767
MLOC_60733.3	2858	0.0	1485 - 1940	99	455 / 457	CUST_24758_PI390587928 CUST_31248_PI390587928 CUST_767_PI390587928	ABC10767
MLOC_60733.1	3638	0.0	2259 - 2714	99	455 / 457	CUST_24758_PI390587928 CUST_767_PI390587928 CUST_31248_PI390587928	ABC10767
MLOC_66232.3	1399	3e-144	385 - 902	85	441 / 521	CUST_39321_PI390587928	ABC10767 ABC39782
MLOC_66232.2	3553	3e-144	2539 - 3056	85	441 / 521	CUST_28174_PI390587928 CUST_39321_PI390587928	ABC10767 ABC39782
MLOC_63615.1	3950	1e-108	2723 - 3437	77	555 / 719	CUST_27575_PI390587928	ABC10767
MLOC_66232.1	4081	4e-103	2539 - 2919	85	326 / 385	CUST_28174_PI390587928 CUST_39321_PI390587928	ABC10767 ABC39782
MLOC_53650.2	3668	2e-81	896 - 1191	85	255 / 299	None	ABC10767
MLOC_63615.2	6054	2e-61	2631 - 2971	80	272 / 342	CUST_27575_PI390587928	ABC10767