barSeed - Barley Seed Development Database

Probe ABC10671

Source Contig ABC10671

barSeed

Links

Affymetrix Source Sequence (736 bp)

>ABC10671 736
AGATCTCCGCTTTCCCTGCCTGCGCCGGACGGACGGAGCCACCCACCCAAGCGACCGGAG
CGGCGAGCGGCGGAGAGATGTCGTCGGCGGGGACGGCGGGGGAGGAGACGGTGCGCGCGT
CGCACATCCTGATCAAGCACGAGGGGTCCCGGCGCAAGGCGTCCTGGAAGGACCCGGAGG
GCCGGGTCATCTCCGCCACCACGCGCGCCGACGCCGCCGCGCGCCTCGGCGAGCTCCGCT
CCCAGATCCTCGCCGGCCGCGCCTCCTTCGCCGACCTCGCCGCGCAGCACTCGGACTGCT
CCTCCGCCCGCCGCGGCGGCGACCTAGGCACCTTTGGGAGGAGGCAGATGCAGAAGCCCT
TTGAGGACGCCACGTACGCTCTCAAGGTGGGGGAGATCAGCGACATCATCGACACCGAGA
GCGGGGTTCACATCATCCTGCGTACCGCATAGGGAGAAAGAAGCCCGCGCCGTGGCCGTC
ACAACACCCTCTGATATTATTTAGCACTTTTCCTTCTTCCAGGGCCTGCGGCTCTTCTCA
TTCTGGCAGCCCAAAACTTGAATGAATGAAGAAAAATGTCTTGTATCGTCTCGCCATTTT
GCTACGGTTGATACATATATCACATGTCAGTGTTTGAGCTTATGATGTCTTGATCAGGAA
ATGTTCTTTTTCTCTTCATTTCATTTGTGATAAATCATTTCAAATGAGTGTTGATGCACA
AAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK353872	772	0.0	53 - 772	99	719 / 720	CUST_16972_PI390587928 CUST_16971_PI390587928	ABC10671 ABC14451
MLOC_54115.1	806	0.0	152 - 806	98	651 / 661	CUST_16971_PI390587928	ABC10671 ABC14451
MLOC_54115.2	1655	0.0	1212 - 1609	99	394 / 398	CUST_12888_PI390587928 CUST_16972_PI390587928 CUST_16971_PI390587928	ABC10671
AK372854	3750	1e-86	81 - 337	89	230 / 257	None	ABC10671 ABC11195 ABC11931 ABC24670 ABC45247 ABC49762
AK355098	812	1e-52	320 - 663	78	276 / 353	None	ABC10671 ABC14451