barSeed - Barley Seed Development Database

Probe ABC10434

Source Contig ABC10434

barSeed

Links

Affymetrix Source Sequence (1184 bp)

>ABC10434 1184
GCGGCAGCGGCAGCGGCGGGGAGCTCGTGAAGAAGAAGAGGGGGCGGCCGAGGAAGTACG
GGCCGGACGGGACCCTCGGCTCGGCTGTGAAGGCCGAGGCGGGCGGGCAGTCTGGTGGCG
CGGGGTCCAACTCGAATCCTGACGGCAAGCGCAGAGGACGCCCCCCTGGATCTGGCAAAA
AGAAACAGCTCGATGCCTTAGGTTCAGCTGGGACATCATTTACTCCTCACATAATAACTG
TGAAGCCTAATGAGGATGTTGCCTCGAAAATAATGTCTTTTTCACAACAAGGCCCACGTA
CTACATGTATAATCTCAGCAAACGGTGCGCTGTGCACAGCAACACTCCGTCAACCAGCAA
CCTCTGGTGGCATAGTGACATATGAGGGCCACTTTGATATTCTCTCTCTGTCGGGCTCCT
TTCTGCTCGCAGAGGATGGTGACACTCGCAGCAGGACAGGTGGTTTGAGTGTTGCTCTGG
CTGGAAGCGATGGACGTGTTGTAGGAGGTTGTGTTGCTGGAATGCTTATGGCTGCAACGC
CTGTCCAGGTTGTGGTGGGCAGCTTCATCGCCGAAGGTAATAAAAAGCCAAAGGAAGAAC
AGCCGAAGCGCGAGCCAACATCTGTGCCGATGCCAACATCTATGCCGATGCAGACTGCTT
CTGGCTTTGGTGCAGCAGCCTCTGCTGCTGCAACTCCATCAGATGGAACATCGAGTGACC
ACTCTGACGACCCAGGGAGCCCTATAGGACCCAACGGCAGCGCATTCAACAACGCAGGCC
ATCCGACCCACGCTTCATATGCTCCGATTGGCTGGTCACTCTCCGGGAACCAAGGCCGCT
ACGACCCAGACATGAAGATGGTGACCGACTAATGGCTCTCAAATTTACAGCAGATTCATT
TTTAGTATTTGACATAGTAGAGTGTAGGGTTCCCTGCACCGGCGCCAGCGAGTCATTGTC
GGCCAATAATCCGGTGTGCTAGAGGTAGTCGGAGAGCCTTCCATGGAAGGCCTGTGGAGC
AGTAATAAGTAGCATCGTCTTGCCCTGTTATTGTTGCTTTTAGTTTGTAGTATCTCTTAT
CTGCTTTCGCAATTAGTAGCTTATGTTTGGAGTTGTTATATCCTAGTCAACGGTTTCTAT
TATCCATGAATTTGTGTTTCAGTATAGTAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK369953	1620	0.0	456 - 1620	100	1165 / 1165	CUST_38560_PI390587928	ABC10434
MLOC_30854.1	658	0.0	1 - 652	100	652 / 652	CUST_38560_PI390587928	ABC10434
MLOC_11592.1	459	0.0	1 - 459	95	435 / 459	None	ABC10434
MLOC_79902.1	774	1e-113	552 - 774	100	223 / 223	None	ABC10434
MLOC_49759.1	364	2e-71	1 - 177	94	168 / 178	None	ABC10434
MLOC_79902.2	1221	2e-82	1055 - 1221	100	167 / 167	None	ABC10434