barSeed - Barley Seed Development Database

Probe ABC10092

Source Contig ABC10092

barSeed

Links

Affymetrix Source Sequence (742 bp)

>ABC10092 742
CGCTTCACGCAGATATTTGAAATTGGGGTTCCTTCTCGCAGTGAAAGAAGCAAGATACTT
CAGGTTATACTGAAGGGAGAAAACGTCGAGTCTAACATTGATTACGATTACATTGCCAGC
TTGTGTGAGGGCTTTACTGGGTCAGACATCCTAGAACTGTGCAAGCAGGCTGCATTCTAT
CCTATCAGAGAGATTTTGAACAGCGAGAAAGATGGGACAAGAGCAAACAGTCCAAGAGCC
TTGAGGCAATCGGACCTGGAGAAAGCTCTTTCAACATCTAGAAAGGGAAAGAAGGCCGCA
AGCGGTGCGGCGTCAGGTTTCCAGTCTCCTGTGTGGACCCGTCCGTCGGATCCTGAAGAT
GACCAGATCTCTGAAAAATCCGCAGTGGAGTAAGAGCTGGCATTACCTACCTAGATTCAG
CATATGTATTGGTTCGGTTAGCGTCATGGGGCTGCTCTCTGGTTTTTGAAGTTAATTGCA
GCTGGCAAAGCCTGCACTGATGTTTTGGGTTCCATGGTTCTCTGTGTGGAAAATACAGAA
TTCTATACTTCTGTGGAACATTTGGTCTGTTCGTCACCTTGTAATTTTCCTTTTGGAACA
TGACTATTGTAGGGTAGACAGACTCTAATACGTACTGAAGAAATGTGCCCTTCCATCATC
ATTCCACGGTTCACAAACACCATTGTTTCTTTTCATATTCATATCATCTGAACATTATTT
ACATCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_54998.2	1626	0.0	1 - 629	100	629 / 629	None	ABC10091 ABC10092
MLOC_54998.1	1768	2e-163	1 - 312	100	312 / 312	CUST_34745_PI390587928	ABC10091 ABC10092
MLOC_54996.1	3169	1e-66	1826 - 1963	100	138 / 138	CUST_34745_PI390587928 CUST_32192_PI390587928 CUST_12247_PI390587928 CUST_12248_PI390587928 CUST_34744_PI390587928	ABC10091 ABC10092 ABC21364