barSeed - Barley Seed Development Database

Probe ABC09975

Source Contig ABC09975

barSeed

Links

Affymetrix Source Sequence (659 bp)

>ABC09975 659
GCTCAATCAAATCAAAAAAGAAAAGAAGAAGCGAGCGAGGGGCAGAATCACCAATGGCGG
GCGGTGGGCTGTCCGGCGGCGCGGCCGCGTTCTGGGCGACAAGAGCGCTGGAGGTGGTTA
AGCGGAACGACTCCCCGGGGCTGTTGTGGAAGCGGATCAAGCTCACCACCACCCGCAAGA
ACAACGCCAAGAAACGCCTAAAGCGCCTCTGGCAGAACGAAGCAGTTATAAGGGCTTGTA
CTCAAGCAGAATCATCGTCAACTTCAAACACGGCTGCCACATCTGAGAAACAGCAGTAGT
TTGCATAGTCAACTCATGGTTTGTGGTGAAGAAACTGATATGCAGTTAAAAGATGGGCGT
TGAACTTGCATAACATGCTGAAGCCTAAAACAATATCCTTCCATATACGTTTTAGTTTGT
CTTGTCAGAAGTTTGAACAATTGCATGCATGTACGCATCGACTTTCTTCATTAAGAGGAT
ATCATTCCTTGCCGCCATGGGCATCTCTGCCCCATCCGGCTTACGTAAGCTTGTAGCATC
ACTTCCCACTTCATGAAAGTTCACTGTTTCTTTTTTGTTTTGTTTGACAGTAGTACATTA
CTTTATTCTAGAAACTAAGTGGGCGCCATTTGTGATGAGATTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK373225	690	0.0	19 - 660	99	640 / 642	CUST_33769_PI390587928	ABC09975
MLOC_38721.1	1201	0.0	478 - 908	100	431 / 431	CUST_33769_PI390587928	ABC09975
MLOC_54073.1	601	7e-109	258 - 471	100	214 / 214	None	ABC09975
MLOC_71918.1	388	1e-85	126 - 324	95	190 / 199	None	ABC09975