barSeed - Barley Seed Development Database

Probe ABC09838

Source Contig ABC09838

barSeed

Links

Affymetrix Source Sequence (1144 bp)

>ABC09838 1144
GAGGAATCTCATATTGCCAAGCCCGGCGGCCCGCACCCTGCCAAGACTCGAGAGTCAAGA
CACCGCCGCCGCCCCTCCTCGCCGGCGCTCCACCGGCTCGCCGCCATGGCCCCAGCCAAG
TGGCTGATGCACTGGCACCCGAACCCTGGAGTGACGCTCAATACCCAGATCCTGTCGGAG
GCCTGCGGCTGCGCGGAATCCCTCGGCGGCACCAAGGACGGCCGCTGGAAGACCTCCATC
ATCTTCTACCGCCCGATGACGCGAGACGGCGCGGGCGGGGCGCAGCAGAACCAGCTCGCC
GATGTGCCCCGCGAGCTCCTCGGAGTCGCGCTCCACGAGCGCCCCGGGCTCTACTTCTCC
ATCCTCCGGAACCAGCGCCTCGTCCTGCAGGCGGACGCTGCCTTCTCCCAGGTCATGGAG
AAGCTCCAGTCCTTCAAGGCCCGCGTCAACCTCAACTTCGAGGGATTCCAGTATCAACTC
GGTGATTTTTGCTTGAGGATAGGAAAATGTGTTCCTAACAATACTGAAACACTGAGAGGA
ATCATGATGGAGGTAGAGTATTACCCCCTATCTTCCATCGAAAAGTCCAGGGCCATTATG
GTAGACTTCTTTGACATATGGCAGGAAACGCTCGCAAAGAAGTCGCTGCCTGGTCGATTC
ATCCATGTGGAATCTAATTTCTCAGAGTATGGTCTTTCGGATCACTACTCTTTCCAGCAC
ACCGCAGTTCAGTACGCTACGTGCTTGCAGCAACTCATGGCAGCTGTGAGGGCCTAAGAT
CCGCGGATGGAACTTTGAGAATATCATGATGTTTAACTTGTTCCCAAGATCCTGATAACA
TCGACATAGGGCAGGACATGCATCTTATCTGCTGAAATGTAATCAGTTTGTATGTTGTTC
GCGGCTAAGTATCCCTTCCTCTACCATGTTTCAGATGTTAACCTGATTTATTTGCAAGGA
AAATCAAGTTGTAATGGTCATCTGAGCAACCGAGTAGCTGTTGTTTGTGTTCTCATTAGC
TCCCAGTAGATAATGCTGGGTAATGTCGCTGTACAATTTTTTTGAACATGAACATCTGAT
GCTGTCGTAACTATCATGGATGGGATATATTGGCTATATCTTACAAAAAAAAAAAAAAAA
AAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK362143	1138	0.0	6 - 1129	99	1122 / 1124	CUST_30951_PI390587928	ABC09838
MLOC_64590.1	1872	0.0	37 - 701	99	663 / 665	CUST_33461_PI390587928 CUST_30951_PI390587928	ABC09838
MLOC_8186.2	1051	0.0	31 - 751	89	648 / 729	None	ABC09838
MLOC_70737.1	1393	0.0	6 - 467	100	462 / 462	None	ABC09838
MLOC_8186.3	742	0.0	31 - 658	89	562 / 635	None	ABC09838
MLOC_8186.1	595	4e-158	31 - 526	87	439 / 504	None	ABC09838