barSeed - Barley Seed Development Database

Probe ABC09715

Source Contig ABC09715

barSeed

Links

Affymetrix Source Sequence (995 bp)

>ABC09715 995
TGCAAATTTCCATTCTCTCCCTAACACTGCCTCTGTGCCTCGTCCAACCGTGGCTGTAGA
GGAGCTCGCCTGAGACTTGTTCCGTCTCTCAAGAAGGCTAGCCAGCTGCCGTCCATCTTG
TTATCTCGTTCTCTCCCTCGGCTTTCCCTTCTTTCTATTATAATTTTTGTTTTCTCCAGT
CCAGGGAAGGGAGCCGCCATGGAACCGTAGCACCCTGCCTCTCGTGGAGCTCGCCGCCTC
CAGCTACCTCTCCATTGATCAGTCCGACGCCTCCGGCCAGATCTCCCTCGATCCGTCCGC
CACGCGTCGGATCCACGCCGGAGCAGCCGGATGCGCCGCCAGGGAACGCATCACCCCATG
GCCTTGGAGCTCGCCGCCTCCAGCTACCTCTCCATTGATCAGTCCGACGCCTCCGGCCAC
ATCTCCGTCGATCCGTCCGCCAAGCGTTGGATCCACGCCGGAGCAGCCGGATGCGTCGCC
AGGGAACCGCATCACCCCATGGCCTTGTAGCTCACTGCCTCGAGCTACCTCTCCATCGAT
CCGTCTGTCCCGCTGCCGGATTCGTTGACTGCTCAGCCCGTCATGGGTCTGTGCCTCGAT
CTGTTTGCCCCGTCGCTCGATGCACGCGGGAGCAACTGGGCTGCGGGTTCGATCTGTCTG
CCCCGTCGCTGGATGCATGCGAGAGCAGCTGGGCTGCGGGTTGATTTATCAGAAACTGGG
GAGAAGGGGGTTTATGTAAAACAGAATCGTTTCTCCCACTTAAATTGGTAGTGCGGGTTG
AATATGTACAATATTAGGAGCTTTTCTGCAAAACAGCCTATTATTAGGGAGAGATATATC
TCTTAGTTAAATTTTAAATTTAAATTTAGTCCGATCGCGCTGGATCACATCAGCGCGGAT
CGCATGCCCGATCAGAACCAAAAAGGGCATGTATGCTCAGTTTCTACATGCCCGGATCCA
AAATAACATCAGTTCAATAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_199.1	1333	2e-70	520 - 730	90	193 / 215	CUST_15274_PI390587928	ABC09715
MLOC_199.3	725	2e-70	288 - 498	90	193 / 215	None	ABC09715
MLOC_199.2	729	2e-70	292 - 502	90	193 / 215	None	ABC09715
MLOC_199.4	859	0.0	34 - 437	99	398 / 404	None	ABC09715
MLOC_70164.1	1264	1e-68	594 - 808	89	193 / 217	None	ABC09715
MLOC_71000.1	598	1e-108	195 - 465	93	253 / 271	None	ABC09715
MLOC_39881.1	627	5e-52	500 - 624	97	121 / 125	None	ABC09715
MLOC_71000.4	314	8e-55	161 - 314	92	142 / 154	None	ABC09715
MLOC_71000.2	338	5e-52	190 - 338	92	137 / 149	None	ABC09715
MLOC_71000.3	339	5e-52	191 - 339	92	137 / 149	None	ABC09715