barSeed - Barley Seed Development Database

Probe ABC09645

Source Contig ABC09645

barSeed

Links

Affymetrix Source Sequence (1136 bp)

>ABC09645 1136
AGCGGCGAAGAAGGAAAAATATCGCGCCTCCCCCCGCCGCCGATCAGCGCCTCCGGTTCT
GGATCCCCGTGCGGATCCGCAGCACCGACCTCCGAGTCGAGCCCAGGCAAGTTGTGGGCA
CTGAGTGAAGTGAAGTGCTGGCATGGGGGGCGTGTTTGGACGCCACGACGCCGGCAGGCA
GAGCTCCCACGGTATGAAGCTAGAGTCGAAGATGGTGGAGTCCATGAAGCAGAGAGCGTC
GCATGGAACTTCGGTCAAGTCGTTCAACAGTATTATCATGAAGTTCGCGAAAATCGACAA
GGGCTTGAGAAAATGCAAGACTATCTTTCAGCAATTCGATGAAGATTCCAATGGTGAAAT
TGATAAAGAAGAGCTCAAGAATTGCTTTCAGAAGCTGGAAATCTCATTCACAGAGGAGGA
GATAAGTGATCTCTTTGAAGCTTGCGACATAAATGAAGATATGGGCATGAAGTACAATGA
GTTCATTGTCTTTCTGTGCCTTGTTTATCTTCTCAATGACCCTGCTGCATCAGAAGCAAA
AACAAAGATGGGATTAGGAGATCTTGAGTCAACTTTTGAGACCTTGGTTGATGCATTTGT
CTTCTTGGATAAGAACAAGGATGGGTATGTGAGTAAGGATGAGATGATTCAAGCAATAAA
TGAGAGCATACCAGGGGAACGCTCTGCTGGCCGTATAGCCATGAAAAGATTTGAGGAGAT
GGATTGGGACAAGAACGGGATGGTTACCTTCAAGGAATTTCTGTTTGCATTCACTCGCTG
GGTTGGGATAGGCGAAAACGAGGACGAAGATGAATGAATGATGTGGAAGCTGACAGCCGA
AGAATGGCTGACTATAAATTGGTTGCGTGGTGGTTTTATCTTTCTGTTAATAGTGACTCG
GCATGTTCCATAGAAGGACTGACATGTCTGAACACCTGTACCAAACAGTGTCTGTGACGG
CTTCGCCTCCATTGCAAGTTATGTTGTGTAGTAAGCAAAATATTGAAACATTGATAGCAA
GAGGGCTCGTGTCAGCAACAACCTTGGCTCACCCATGTTAATTTGGTCTTGTGTAGCTTA
ATACTACTCTGTTCCTAAATATAAGTCTTTTTAGAGATTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_15522.5	1154	2e-51	59 - 169	100	111 / 111	CUST_29272_PI390587928	ABC09645
MLOC_15522.1	1564	0.0	622 - 1564	100	943 / 943	CUST_29272_PI390587928	ABC09645
MLOC_15522.2	1569	2e-51	476 - 586	100	111 / 111	CUST_29272_PI390587928	ABC09645
MLOC_15522.4	1522	0.0	406 - 834	100	429 / 429	None	ABC09645
MLOC_15522.3	1557	2e-51	278 - 388	100	111 / 111	CUST_26383_PI390587928	ABC09645