barSeed - Barley Seed Development Database

Probe ABC09454

Source Contig ABC09454

barSeed

Links

Affymetrix Source Sequence (1117 bp)

>ABC09454 1117
GGTTCCCACAGATCAGAGGCAATCAACTGTCGGAGGTAATGAAATCAGCCAGTAGTGAGG
CAGTCGACCTTATATCCTCTTTGTGCTCGTGGGATCCTTGCAAGAGACCGAAAGCTGCGG
AAGTTCTCCAGCATGCCTTCTTCAAGGATTGTACATATGTTCCAGCTTCTGTCCGGCCAA
AAGTTGCAGGTCCCCCTAAAACTCCTCCGGGTGTTGGAGTAAGAGGAGTTTCAGGGCACA
TTGCTCGGAGATACTCCACTGGAGCTCTCTCCACAAGCAAACCTGCTGGCAACATTTCTA
TAAAACCGAACAGCTTATCTAAGATCGGTGTGCAAAGAAAACTTCAATTGGATCGCCAGG
CACCAGAGAAAAAAAGTACACGGCCCGCTGAGAGTAACACCAAACAAACTACTAGTCGAG
TACCGGCAAGGAATAGCCCAGTGAACGCAAACCCGATGTTAAGGCATTCACGCAGCTTAC
CTGAAACTGGTCGGGCAACGGTTCATAAGGTTTCGAGTATCACCGAAAGGCTTGCTCATA
TGTCTGTGACCTCTCGAACACGCACGACTGTGAAGCCCCCTGTCCCGCTGTTGAAGGCTG
GGCATCTCAAGTCAGACTTCCTTGGGAAATCCGATGAAATCCCTCCGGCAAAGAGATTGA
CAAGAAAGTTGGTGAGCTAAAGGAGTAGAGTGAAGAACCGATCGGCTGCAGAGAGGCATG
TAGGCTACGGAGCTAAAACCAGGTTTGCCTCAGAGCCGACCGAGTGTTTTGCCTGTTCAT
GGTCCTTCTGGTTGTTTCCTCCCCCTGCTTGCTTTGTTCATGTGCCACGGTAGAGAATGT
GTTGCGAATGGGCTCGAGCCTGCTGATCTTTCGCTGTACTGGGGTGTGAATTTGCCCATG
CCCTGAGTTTGTCCTGTCTATGAACAAAACATGTGTGGTCTTTGTTTGTCCTGAGTTTGT
GAACTAGTTTTATCATTCGTCCATATCGCGGACCATTGTCCTGTTCATGTGCAATCTAAC
AGTCGACAAACCCTCCAATGAAGAGGATAACTTGGTTTCGCTTGTACAGTTTGCTGAGAT
TTTATAGAGCATGTTAGTGTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK362735	2736	0.0	1635 - 2734	99	1098 / 1100	CUST_30959_PI390587928 CUST_17991_PI390587928	ABC09454 ABC46784
MLOC_34019.2	2546	0.0	31 - 1130	99	1096 / 1100	CUST_17991_PI390587928 CUST_30959_PI390587928	ABC09454 ABC46784
MLOC_34019.3	2611	0.0	31 - 1130	99	1096 / 1100	CUST_30959_PI390587928 CUST_17991_PI390587928	ABC09454 ABC46784
MLOC_34019.4	1790	0.0	1 - 1084	99	1080 / 1084	CUST_17991_PI390587928	ABC09454 ABC46784
AK366131	2539	0.0	1559 - 2539	99	980 / 981	CUST_17991_PI390587928	ABC09454 ABC46784
AK358457	3031	3e-69	1851 - 1996	99	145 / 146	CUST_17991_PI390587928 CUST_30959_PI390587928	ABC09454 ABC46784
MLOC_34019.6	2516	0.0	1 - 951	99	949 / 951	CUST_17991_PI390587928	ABC09454 ABC46784
MLOC_34019.5	2476	0.0	1 - 951	99	949 / 951	CUST_17991_PI390587928	ABC09454 ABC46784
MLOC_34019.1	2348	0.0	129 - 872	100	744 / 744	CUST_17991_PI390587928	ABC09454 ABC46784