barSeed - Barley Seed Development Database

Probe ABC09298

Source Contig ABC09298

barSeed

Links

Affymetrix Source Sequence (990 bp)

>ABC09298 990
CCGCATGTTCCCCCCTCACGTCATCGCCCTCGACCGCGCGTCGCCATCGTCGTCCCTCTC
CCTCGAGCTCTCGGCGACTCCTCGGAGCCGATGAGAGGCGCCGGGCTCGCGGCGGGCCGT
GACGATTCCGGTGCTGGAGCAAGAATTCGCGGGGAGAACTCCGGCCCCGGGGGCTGCTCT
CACATGGACGGGCTGCCCGGGGAGCTCTGCTTCAAGATCTTCCACCTCCTCGATCACCAG
GCCCTCGCCGCCGCTCCCCAAGTCTGCAGGAAGTGGAGCGCGTTGTCCTGCGACGACGAG
CTGTGGCGCAAGCTGTTCGAGGACAGGTGGGGAGCCGACGCCACGGCCTTCTACGCGCCG
GAGCCGGAGGGCTCCAAGCCCTGGAAGGACGTCTTCGTCGTGCAGGACCGATGCGACCGA
TACGGCCTGGGCGTCAGGATCATCAGGGAAGGAAACGACTACTACCTCATCTACCAAGGC
GAGATCCAGAGCTACCTGGGCACCAGCTGCGACGCCAAGGACGCGCAGCCGCAGGGCGCT
CAAGCCGACAAGAGGCAGATATCTGACCGGATCCTCTTCTTCCTGGGAGACCTGGAGACT
GCTTATGCGGACGCCAAGCGTGTCGAGGCGTGACCTCGTCCTTCAGAACCAAAGCTGTTG
GAAAATGTCTGTAAAATCCTTGTCCCTGTTTTGCATAGCTCGTGCATAAGGTTGTATCTA
GTCTACGTACAGACAAGCCATAGTGTTTCACCGTCGTATTCTTCGTCTGGACGTTACACC
CATAGTGTTTCACCGTCGTATTCTTCGTCTGGACGTTAGTGTTTCACCGTCGTATTCTTC
GTCTGGACGTTACACTTCAGATGTTCACCTTTTACTAATCTTCTTGCAGTTCCCAAACTG
CAGATAATGGACGATACGAGTTATTCAGTCGCTTATGCTTGTAATAGCAGTAATGAAAAC
AATGGCGAAGGGCAACAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK249234.1	945	1e-63	768 - 928	95	153 / 161	None	ABC09298
AK355599	998	8e-90	761 - 968	96	200 / 208	CUST_29061_PI390587928	ABC09298
MLOC_6341.1	4344	1e-78	978 - 1140	99	162 / 163	CUST_19147_PI390587928 CUST_11142_PI390587928 CUST_29061_PI390587928	ABC09298
AK364982	1108	4e-88	904 - 1108	96	197 / 205	CUST_29061_PI390587928 CUST_29060_PI390587928	ABC09298
MLOC_6341.2	4448	1e-78	1082 - 1244	99	162 / 163	CUST_19147_PI390587928 CUST_11142_PI390587928 CUST_29061_PI390587928 CUST_29060_PI390587928	ABC09298
MLOC_6342.1	2736	1e-78	1227 - 1389	99	162 / 163	CUST_19147_PI390587928 CUST_11142_PI390587928 CUST_29061_PI390587928 CUST_29060_PI390587928	ABC09298