barSeed - Barley Seed Development Database

Probe ABC09234

Source Contig ABC09234

barSeed

barSeed Home
List Cluster Sets
List Cell Wall Probes

Links

James Hutton Institute Home
BioSS Home

Affymetrix Source Sequence (467 bp)

>ABC09234 467
CACACAAGCGACTTATTTCCTTCAACAATGGCTCTCCTGAAGAACTTGGCCACGTACCTG
TGCGTGATCCTGGCCTCGCTCGCCTTCGTGGCGCAGGGCGCGCTCGCCGCAAGAGGTGCT
TTGGGCAACGTGAAGAGATACACGGTTACGGACCCGTCCGGTGCGGGTTATGGAAGTGGG
TATCCTCCATGATACGCCGGAGATGATGATACTTGGACCACGGAAATACTACAAATAAGT
ACGGCAGACCATGAATAAATTTGCACCTATTTCTGATATATATAGTACTCTCTCCGTCTT
AAAATAAATGTCCTTGATCTAGTATAATGTTTGTATTAATTTAATACTAAATCTACAATG
TTTATTTTGAATGGAGGGAGTAAAATATAACGATGCACGGTTTTGTATTGTTACTATGTA
CTGTGTTCCCCTTTCCGAATAAACGCCCTTGTGGTGGCTTGTGTGTC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK361385	757	4e-95	442 - 680	93	224 / 241	CUST_6622_PI390587928	ABC01159 ABC01179 ABC09234
MLOC_60443.2	950	3e-96	560 - 845	89	256 / 287	None	ABC01159 ABC01179 ABC01185 ABC09234
MLOC_60443.3	953	2e-93	560 - 848	89	257 / 290	None	ABC01159 ABC01179 ABC01185 ABC09234