barSeed - Barley Seed Development Database

Probe ABC01159

Source Contig ABC01159

barSeed

Links

Affymetrix Source Sequence (918 bp)

>ABC01159 918
GACTTATTTCCTTCAACAATATGGCTCTCCTCAAGAACTTGGCCGCGTACCTGTGCGTGA
TCCTGGCCTCGCTCGCCTTCGTGGCGCAGGGCGCGCTCGCAGCCAGAGCAGGTGCTTTAA
GCAACGTGAGGGGGTACACGGTTAAGGACCCGCGCGGTGGTGGTGGTTATGGGAATGGGT
ATCCTCCATGATAGGCCGGAGATGATGACACTTGGACCACGGAAATACTACAAATAAGTC
CGCGTACCATGAATAAATTTGCACACGTTGCCGATATATAGTAAAACACAGTGATGCACG
GTTTTACTCCCTCTATACGTGAATAATTACAGTTGAAACGAACTAGTCTAGTTTTCCTCA
ACTATAATTATTTAGCTACAGAGAAAGTATATTGTTACTACATACTATGCTTGGCTTTCT
AAATAAATGCCTTGTGGCGGCTTGTGAGCTTACGGCGTGTCTCGTCTGAGTTTGGCCGAC
GCCGAGTCTGTTCGGGTCGCGCCCTAACAGGTCGTCAAGTCTCTGCATGAACCGAGTCGT
TATACAACAAGATGCAGAATGCATTGGTCATAGCGATTTTCGGCTGCGAGGTCACTACCT
TGTACCTTGAACGAATAATAGAAGGAGAAGAAAAGCTGTGAAAAGTTTACGCGGTGCACA
TCTCTTCACTCTTGTGGGCCGTGCTCTCTCTTGCGAGGAATTATACTGGTTGCAAGGAAT
TGTTGTCTCACACAAGCGGAACCTTTTAGTTCTATAGATTTTCATGCTCTACGTGCAAAT
ATAATTTTTGTCATAGAGTTTGCATTACGATAAAATTCTGTCCTTGAACGTGTCATCCCA
TGAAAGAGATGTATATTGGTTTCAAAGAATGTGAAGCGATATACATATCACTCCTCACAC
TAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_60443.3	953	0.0	1 - 839	100	839 / 839	None	ABC01159 ABC01179 ABC01185 ABC09234
MLOC_60443.2	950	0.0	1 - 836	99	836 / 839	None	ABC01159 ABC01179 ABC01185 ABC09234
MLOC_60443.1	1066	0.0	1 - 790	100	790 / 790	CUST_6620_PI390587928	ABC01159 ABC01179 ABC01185
AK361385	757	2e-180	21 - 380	98	357 / 363	CUST_6622_PI390587928	ABC01159 ABC01179 ABC09234