barSeed - Barley Seed Development Database

Probe ABC08906

Source Contig ABC08906

barSeed

Links

Affymetrix Source Sequence (1273 bp)

>ABC08906 1273
GCCTCTCTCCTCCCCCCCCGCCCTCCTCCTCGGCGCCCGCCTCGCGAATCCGCCGGAAAC
CCCCCCGCCGCTCCCGGTTCTAGCGCAGCGCGGAGATGGTAGCCGCGCGCTTCCTCGCGC
GGGCCACGAGGCAATGCGCCGCCGCGGTGGTGGCCGCCTCTGCTAGGCGGCCGCTCGGCG
GCGTGGCGGTGGCCGCCGCTCGCCCGTTCGTCTCTTCCTTCGGCCCCGCCAGGGTACCAT
ATATGTTGAATCAGCCCTTGAGATACTCAAGCAACATCTTTCAAAGGTTTGGCTTTTCAT
CTTCTACTCCTCAACAAAATGATAAGGAGGTACACGAAGCCAAAGACCAGGAAAGTACTG
CACATGAATCAAATGGTGAAGCTTCAAAGGAAGACAGTGGTTCGTCTGGAAGTACAGAAG
ACCTTGATCTGTCAAAGGAGGATCTAGTGAAGCTAGTTTTTGAGAAGGATGAATTATTGA
CCTTGAAAGATGAAGAGGTCAAAGATATGAAGGACAAGGTTTTGCGCAGCTATGCAGAAA
TGGAAAATGTCATTGCCCGGACAAAGCGTGAATCTGAGAACTCAAAAAAATATGCAGTAC
AGAACTTCTCCAAGAGCTTGTTAGATGTTGCTGACAATTTGGCTAGAGCTTCATCTGTTG
TAAAGGAAAGCTTCTCAAAATTAGATACATCTGAAGATTCTAGTGGAGCTGTACCGTTAC
TAAAAACCCTACTGGAGGGTGTAGACATGACTGATAAGCAACTTGGAGAGGTTTTTAAGA
AGTTTGGAGTCGAAAAGTTTGATCCAATGAATGAGAAATTTGATCCTGATAAGCATTTTG
CACTTTTCCAAATTCCTGATCCTTCAAAACCATCCGGAACTGTTGCTTCTGTTGTGAAGG
TGGGGTACATGTTACATGATCGCGTGCTCCGTCCTGCGGAAGTTGGTGTTACGGAGGGTG
GTCCGTCCGAAGAGCCCGAGGACAAATCAAGTGGAGATTAGATTAAATCGGAATCTAGTG
GAGTAAAATATACCAGAAGCAAGAAGGCGTAGCTGTTCCTGCTTGACAACCGGTACACTC
ATCAGCGAAGGAGCTTGGCGATTGCAGTGTTTCGGATTGTTTTTCAATGGTAAAACACAA
GATTGGCTTGTTGAAATCCCATTTGTATGGGTGCACGTCACACAATTCCTTAGCAGTACA
ACGTTTCTGAGAATTTTGCGAGGGTTTGGAAACCTTAATAAGAGCTTTTTTTTTCACAAA
AAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK377032	1262	0.0	15 - 1260	99	1245 / 1258	CUST_38383_PI390587928	ABC08906
MLOC_72354.2	1020	0.0	1 - 1020	100	1020 / 1020	None	ABC08906
MLOC_72354.3	1056	0.0	1 - 1056	99	1054 / 1068	None	ABC08906
MLOC_72354.1	1143	6e-122	906 - 1143	100	238 / 238	None	ABC08906
MLOC_43774.1	213	8e-66	1 - 137	100	137 / 137	None	ABC08906