barSeed - Barley Seed Development Database

Probe ABC08865

Source Contig ABC08865

barSeed

Links

Affymetrix Source Sequence (1088 bp)

>ABC08865 1088
GGAATTCAGACACGAGGTCGGAGATGAATTGCGTATGTGCGAGCTCGGTGGCAACCACGA
GACCTCACTTCGGGCGTTCCTCCACTCTCCACCGGCGGTTGCTCCCCATATCGGATGCTC
CCGGGGCGGCGGCGCCCTCCACTACTACCCCTTCAAGCGGTCGTGGCTGCAGGGGTGGCC
CTCGGGCGAAGAGCAGCGGCGACACCAACGGGAGAAAGCTTTGGTGAATGAGTGCTTTAA
CGTCATAATTATGAAACCCTCATGCACCCAACAGGTTTGTTACTTCAACCAAGTGATAGA
GGAAGGAAGAAGCAAGTTGCAGGGTTGGTCATTCACAAACACCCCTGCCTCAAGTACTCA
CCGTCAAGCATGGACCATGCTCGTTGGGAGATCACGCTCACACCAATTCACCACGGAGGT
CACATGAGTTTATCATCAACCTGCCAGCCTCGCCTTCATCACCCGGAGAAAACCCTACAA
CACCTCGAGGAACACCGAGTGGTGCTAAAGATATTGCCTCCAATGCAAGCATTAAACAAG
TTAAATATCAACAGAGACAAAGCCGTGATAAGGCAAGGAGAAATAGCCTAACACCCGAGC
AAAGAGCAGAAATAAATGCACGTCGAAGAGCATCTAGACAAAATAAGACTATAGAAGATA
GGAATGCAAGCAAAAGGGCTGCGAGTGAAAATCTGACAACAAAGAAGAGGCAAGAGATGA
ATGCCTGTAGAAGGGAAGCAAGTAAAAATATATCAGCTGAGCAGAGGCAAGAGATGAACG
CCCGTCGAAGAGCACGCACGCAGAGCATACCACCAGATGAGAGGAAGGCATTGCGGGCTC
AACGAAAGGCATACCTTGCAGCTAAGCGAAAGACCACATGCGCTGAATGCATCGCAATGC
CTTGCCCAGATGCATATCTCTAATGAATCACCATGTTCTATTACTGAAGTTTGCATGTGT
CCAATCTATATTTGTCAGTCAATTGTTAATCATGCTTTGCGTAATTCAGTTGTAGATTGC
TATTCTACCAGTTCTCTATGAAGGTGATTATTAAATTAAAGTTACACACTTAAAAAAAAA
AAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_28251.2	1087	0.0	381 - 986	100	606 / 606	CUST_21738_PI390587928	ABC08865
MLOC_28251.1	829	0.0	329 - 829	100	501 / 501	None	ABC08865
MLOC_74399.1	1937	4e-73	459 - 611	99	152 / 153	None	ABC08865
MLOC_74399.5	1482	4e-73	4 - 156	99	152 / 153	None	ABC08865
MLOC_74399.4	1819	4e-73	340 - 492	99	152 / 153	None	ABC08865
MLOC_74399.2	1769	4e-73	288 - 440	99	152 / 153	None	ABC08865
MLOC_74399.3	371	2e-72	220 - 368	100	149 / 149	None	ABC08865
MLOC_46534.1	154	4e-63	2 - 154	95	146 / 153	None	ABC08865
MLOC_49425.1	396	4e-58	59 - 181	100	123 / 123	None	ABC08865
AK353744	4406	4e-53	4100 - 4213	100	114 / 114	None	ABC08865