barSeed - Barley Seed Development Database

Probe ABC08855

Source Contig ABC08855

barSeed

Links

Affymetrix Source Sequence (730 bp)

>ABC08855 730
TATATCATGCCCGCACAGCCGCTGACGCNTACGTCTTCCTGCTCAACTGGTTCAAGCGGT
TCCCGCAGTACAAGCACCACGAGTTCTACATCGCAGGCGAGAGCTACGCCGGTACGTGAG
CGTAGTAGACGCAGCATTTCAACGCTCTTGCAGTTCGGTCAGAGCACGCAACTGAAACTT
GACACTGACGGGTGGCGTACGTTCTTGTCAGGGCATTACGTTCCGCAGCTATCGGAGAAG
ATCTTCGACGGCAACAAGCACGGGCCCAAGGAGAACCGCATCAACTTCAAGGGTCTCATG
GTAGCCAATTATTGACCACGGCATCGTCGTAATGTTATTCTTACGGCTCGCTAGCTGCTT
AATTAAACCATGACGACGGCGACGGCGACGATGATGCAGGTAGGGAATGCTCTGATGGAC
GACGAGACGGACCAGGCGGGCATGGTCCAGTACGCGTGGGACCACGCCGTGATCTCCGAC
CGGGTGTACTCGGACGTCAAGGCCCACTGCGACTTCGCCATGGACAACACCACCGCCGCG
TGCGAGCAGGCGTTGGAGGACTACTTCGCCGTCTACCGCCTCATCGACATGTACAGCCTC
TACACGCCCGTCTGCACCGACAGCTCCTCCTCCTCGCCGCTCGCCAAGAGGGTCGGCGTC
CACGGCGCCGCCCCCAAGATCTTCTCCAAATACGTAACGTCCCTCTTCGATCGATCACCA
CCGTCTCAAC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_65439.2	2229	2e-174	720 - 1051	100	332 / 332	CUST_30868_PI390587928	ABC08854 ABC08855 ABC28887
MLOC_65439.3	1516	7e-154	685 - 979	100	295 / 295	None	ABC08854 ABC08855 ABC28887
MLOC_65439.1	2085	7e-154	975 - 1269	100	295 / 295	None	ABC08854 ABC08855 ABC28887