barSeed - Barley Seed Development Database

Probe ABC08802

Source Contig ABC08802

barSeed

Links

Affymetrix Source Sequence (832 bp)

>ABC08802 832
GACTCTCGCACGCAGGAAGGCGCCTCCTGCCTGGACAGACCTCTCCTTCCTTCCCCGCGA
GCACCGTCGCCGTCGTCGTCCATCCCGATGCAGCAGCGGCGCGGCCGGCCGTCCGGCACG
GATGGCTCCGACTTCTCCTACCGCATGGTCGTCGACTCCCGGTACCAGAGGGTCGCCGAC
GGCAGATCCCGCCTCGCCCGGCTCATCCTCGTGCAGATGCTGCACCAAGTCGCTGGGGGC
GCGTCGCTGCTGCTGTCGCTGTCGAAGGGGGCGGAGATAAACAAGTTCGCCGTGCTGTCC
GTGGCCGCCGGGCTGCTGGCCATTCTGTTGGGGGAATTTGGGCGGAGGCGGACTGTGGCA
GTGTTTCTTCGGTTGTACACAAGCTTGTCATCAATTGCTATTGCATTCTCTGTGACGTGC
ATTATTCGTTCAGACTTGTTCGTGAAGATCATGAAGCAAAACACAGCAGACATCACAAGC
TATGAGATGTTCGATGTGGTCCGTGTTGCGCTTGGTGTCCTGCTCCAATTGGTGGTCATC
GCAACAACAACCAGACTCCTGCAAAACATGTCTCCTCCCAAGAGAACCTCATGAAGGCCG
TGCGTGACACTGTAGCTGCGCTCTACCAGTACAAAGGAACACCGTCTTGGGTCTTATACT
CATGAAATAGAAATGCTATAGACCTCTAAAGAAACGGCAAATCTCCATGAGTCCATGTTG
ATCATGAGTTGCTTATTTTTAGCCCCTCTTCTGTTCTCCGACTTGCCGGGAATTTTTTTG
TGGTGGCTGAAAGGCTAATTGAAGAACTTCTATGTCAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_36477.1	874	0.0	2 - 789	100	788 / 788	CUST_989_PI390587928	ABC08802
MLOC_36476.4	2350	0.0	1 - 770	100	770 / 770	CUST_989_PI390587928 CUST_15092_PI390587928	ABC08802
MLOC_36476.2	7879	2e-60	2995 - 3121	100	127 / 127	CUST_20311_PI390587928 CUST_26660_PI390587928 CUST_4058_PI390587928 CUST_989_PI390587928 CUST_15092_PI390587928	ABC08802
MLOC_36476.3	7874	2e-60	2995 - 3121	100	127 / 127	CUST_20311_PI390587928 CUST_26660_PI390587928 CUST_4058_PI390587928 CUST_989_PI390587928 CUST_15092_PI390587928	ABC08802
MLOC_36476.1	7879	2e-60	3072 - 3198	100	127 / 127	CUST_20311_PI390587928 CUST_26660_PI390587928 CUST_4058_PI390587928 CUST_989_PI390587928 CUST_15092_PI390587928	ABC08802
MLOC_36476.5	4726	2e-79	4 - 164	100	161 / 161	CUST_20311_PI390587928 CUST_4058_PI390587928 CUST_15092_PI390587928	ABC08802