barSeed - Barley Seed Development Database

Probe ABC08634

Source Contig ABC08634

barSeed

Links

Affymetrix Source Sequence (1542 bp)

>ABC08634 1542
GAGCTAGGACTGCATTTCCTCTTGCTCTGATATTATCTCCTACTCGTGAGCTATCAGTAC
AAATTCATGAAGAAGCAAAGAAATTTGCATACCAGACTGGTGTTAAGGCTTGTGTTGCAT
ATGGTGGAGCACCAATTCATCAGCAGTTGAGGGAACTGGAAAGAGGTGTTGATATACTTG
TGGCAACTCCTGGTCGTTTGATGGATCTGCTGGAGAGAGCTAGAGTATCACTGCAAATGG
TGAATTACTTGGCTCTTGATGAAGCTGACCGGATGCTTGATATGGGGTTTGAGCCACAGA
TACGCAAGATTGTTGAGCAGATGGACATGCCCCCTCGTGGTGTGAGACAGACTATGCTGT
TCAGTGCTACTTTTCCAAAGGAAATACAACGTCTGGCGTCAGATTTCCTTGCAGACTACA
TCTTCCTTGCTGTTGGAAGAGTTGGTTCAAGTACCGATTTGATTGCTCAAAGGGTAGAGT
TTGTCCTTGAAGCGGATAAAAGAAGTTACCTCATGGACCTTATTCATGCACAGAAGGCTA
ATGATGTTCCTGGAAAGAATTCTCTTACTTTGGTCTTTGTGGAGACAAAGAGGGGCGCTG
ATGCTTTGGAGAACTGGTTATATACAAATGGATTCCCCGCAACAAGTATTCATGGAGATC
GTACACAACAGGAAAGGGAGTATGCCCTTAGATCCTTCAAGAGTGGAGCAACACCCATCC
TTGTTGCAACTGATGTTGCTGCTCGTGGGCTTGACATACCAGATGTTGCCCACGTCATCA
ATTTTGATCTGCCAAATGACATAGATGACTATGTTCACCGCATTGGGAGAACTGGAAGAG
CTGGGAAGTCTGGTTTGGCAACTGCATTTTTCAATGAGGGCAATATGTCACTGGCCAGGC
CGTTATGTGAACTGATGCAGGAAGCCAATCAGGAGGTTCCTCAGTGGCTGGAGCGCTATT
CTGCCCGTTCCTCGTTTGGAGGTGGCGGAGGAGGCAGAAACCGCAGATCAGGCGGTGGCG
GTGCTCGGTTTGGTGGACGTGATTTCCGTCGTGACACAAGGGGCGGTGGTGGTGGAGGAG
GTGGCGGCTACGGTGGTGGCGGTGGCGGTTATGGTGGTGGTGGAGGTTATGGTGGAGGCG
CGTCTAGCTCGTGGGACTGATAGATTCACCTGTTGATATGGTGAGAATTGAAATGAAACC
GATGGATGGTATTCTATTGACTTAGCTGAAAACAGATATTGGGGTTTGTGGTCACCGTGG
TGTGGGTATGGTGCCCTTGCCCCCATTTACCTTATTTTGTGGCTGGTTGTTGTCACTGCA
CTTGTGTTTTCCGTGTACTGGTTATTTTCTGACTTGCATCAAAGTCCGGGTGGGCTAATT
TCCTGTGTTGCTGCTGCTGTAGTTTTGTAGTCATTGTTGAGTTGGTTGGTTGGTTGGTGG
TCATTGTTGCGCTCCTACTTTACTAGCAATAGTGATTGGATGCTTTACTGCTCGACTGTT
TGCGGCATGGAATGCTGAGAGAGATTGCTTGCCCTGTGGAAT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK248344.1	2552	0.0	974 - 2527	99	1542 / 1554	CUST_35228_PI390587928 CUST_32838_PI390587928	ABC08634
MLOC_39546.1	1084	0.0	1 - 998	99	996 / 998	None	ABC08634
MLOC_5110.6	1479	0.0	1132 - 1479	99	347 / 348	CUST_32838_PI390587928 CUST_35228_PI390587928	ABC08634
MLOC_5110.4	1330	1e-168	1009 - 1330	100	322 / 322	CUST_35228_PI390587928 CUST_32838_PI390587928	ABC08634
MLOC_5110.8	1123	7e-167	805 - 1123	100	319 / 319	CUST_35228_PI390587928 CUST_32838_PI390587928	ABC08634
MLOC_5110.2	1163	7e-167	845 - 1163	100	319 / 319	CUST_35228_PI390587928 CUST_32838_PI390587928	ABC08634
MLOC_5110.3	1330	7e-167	1009 - 1330	99	321 / 322	CUST_35228_PI390587928 CUST_32838_PI390587928	ABC08634
MLOC_5110.1	1163	3e-165	845 - 1163	99	318 / 319	CUST_32838_PI390587928 CUST_35228_PI390587928	ABC08634
MLOC_5110.9	381	3e-121	1 - 243	99	242 / 244	None	ABC08634
MLOC_5110.7	1536	1e-85	1132 - 1307	99	175 / 176	CUST_35228_PI390587928 CUST_32838_PI390587928	ABC08634