barSeed - Barley Seed Development Database

Probe ABC08327

Source Contig ABC08327

barSeed

Links

Affymetrix Source Sequence (760 bp)

>ABC08327 760
GTAACCCTTTACGTGATGTTGGTTGGCGCCTACCCTTTCGAGGATCCAGAAAATCCCAAG
AATTTCAAAATGACAATTCAGAAAATATTAGGCGTTCAGTACTCGATTCCGGACTATATT
CACATACCCATGGACTGCCGGAACCTTCTCTCAAGGATCTTTGTTGCCAACCCAGCTACG
AGGATCACCATACCTGAGATAAAGAACCACCCATGGTTCCTCAAGAACCTCCCAGCTGAC
CTCATGGACGGTCCCACGGTGAGCAACCAGTATGAGGAGCCTGACCAACCGATGCAGAAC
ATGAACGAGATCATGCAGATAATGGCAGAGGCCACCATACCGGCGGCCAGCGCCCTCGGA
ATCAACAAGTTCCTGCCTGACGGCCTTGACCTCGACGACGATATGGATGACCTGGACTCG
GACCTCGATATCGACATGGACAGCAGCGGGGAGATAGTATACGCCATGTAGTAAACTTGT
GAATATCTGTATGTGCAGAAGCGGTGTTTGCGATCTTCCACCTTGTTTGTTTCTTGAACA
CGCACCAGATTGTTGAGTGGCATTTTGTGTTAAGAAGAGTGTAGAAATGTACATCGAGAG
GTTTGTATTCAGGCTACTGCTTGAGTCTGAAATTGGTGTTGCTGCTGATTGTGTAGCATG
TGTTGTCTAACAAAATATGTTGGGGTTTCCTGTAATCTCTAGTTGATAAAAGGGAGTATT
CACCCGAAAAAAAAAAAAANNANAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_3013.1	1587	0.0	1 - 724	100	724 / 724	CUST_18043_PI390587928	ABC06838 ABC08327 ABC09216
MLOC_3013.2	1878	0.0	1 - 724	100	724 / 724	CUST_18043_PI390587928	ABC06838 ABC08327 ABC09216
MLOC_3013.4	800	0.0	1 - 345	100	345 / 345	None	ABC08327 ABC09216
MLOC_3013.6	1283	2e-54	1 - 116	100	116 / 116	None	ABC06838 ABC08327 ABC09216
MLOC_3013.5	1220	4e-82	1 - 166	100	166 / 166	None	ABC06838 ABC08327 ABC09216
MLOC_3013.3	746	4e-82	1 - 166	100	166 / 166	None	ABC08327